Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Hddc2Q3SXD3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hddc2Q3SXD3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Hddc2Q3SXD3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hddc2Q3SXD3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.82■□□□□ 0.92
Hddc2Q3SXD3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hddc2Q3SXD3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hddc2Q3SXD3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hddc2Q3SXD3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hddc2Q3SXD3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hddc2Q3SXD3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Gm24804-201ENSMUST00000174982 85 ntBASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hddc2Q3SXD3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hddc2Q3SXD3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.77■□□□□ 0.92
Hddc2Q3SXD3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Hddc2Q3SXD3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.77■□□□□ 0.92
Hddc2Q3SXD3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.77■□□□□ 0.92
Hddc2Q3SXD3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hddc2Q3SXD3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hddc2Q3SXD3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Gm16148-201ENSMUST00000119653 893 ntBASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hddc2Q3SXD3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hddc2Q3SXD3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hddc2Q3SXD3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hddc2Q3SXD3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hddc2Q3SXD3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hddc2Q3SXD3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hddc2Q3SXD3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.73■□□□□ 0.91
Hddc2Q3SXD3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hddc2Q3SXD3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Hddc2Q3SXD3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hddc2Q3SXD3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hddc2Q3SXD3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.7■□□□□ 0.91
Hddc2Q3SXD3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hddc2Q3SXD3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hddc2Q3SXD3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hddc2Q3SXD3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hddc2Q3SXD3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hddc2Q3SXD3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hddc2Q3SXD3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hddc2Q3SXD3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hddc2Q3SXD3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hddc2Q3SXD3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hddc2Q3SXD3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hddc2Q3SXD3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.65■□□□□ 0.9
Hddc2Q3SXD3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hddc2Q3SXD3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms