Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CirbpP60824 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CirbpP60824 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CirbpP60824 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CirbpP60824 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CirbpP60824 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CirbpP60824 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CirbpP60824 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CirbpP60824 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CirbpP60824 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CirbpP60824 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CirbpP60824 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CirbpP60824 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CirbpP60824 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CirbpP60824 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.33■□□□□ 0.2
CirbpP60824 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CirbpP60824 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CirbpP60824 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CirbpP60824 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.32■□□□□ 0.2
CirbpP60824 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CirbpP60824 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CirbpP60824 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CirbpP60824 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CirbpP60824 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CirbpP60824 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CirbpP60824 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CirbpP60824 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CirbpP60824 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.31■□□□□ 0.2
CirbpP60824 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CirbpP60824 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CirbpP60824 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CirbpP60824 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CirbpP60824 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CirbpP60824 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CirbpP60824 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CirbpP60824 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CirbpP60824 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CirbpP60824 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CirbpP60824 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CirbpP60824 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CirbpP60824 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CirbpP60824 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CirbpP60824 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CirbpP60824 Gm11175-201ENSMUST00000116172 543 ntBASIC16.29■□□□□ 0.2
CirbpP60824 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CirbpP60824 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CirbpP60824 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CirbpP60824 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.28■□□□□ 0.2
CirbpP60824 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.28■□□□□ 0.2
CirbpP60824 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.28■□□□□ 0.2
CirbpP60824 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.28■□□□□ 0.2
CirbpP60824 Gm6311-201ENSMUST00000073790 878 ntBASIC16.28■□□□□ 0.2
CirbpP60824 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CirbpP60824 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.27■□□□□ 0.2
CirbpP60824 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CirbpP60824 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CirbpP60824 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CirbpP60824 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CirbpP60824 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CirbpP60824 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CirbpP60824 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.26■□□□□ 0.19
CirbpP60824 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CirbpP60824 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CirbpP60824 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.26■□□□□ 0.19
CirbpP60824 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CirbpP60824 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CirbpP60824 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CirbpP60824 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.25■□□□□ 0.19
CirbpP60824 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CirbpP60824 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.25■□□□□ 0.19
CirbpP60824 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CirbpP60824 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CirbpP60824 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CirbpP60824 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CirbpP60824 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CirbpP60824 Mir6538-201ENSMUST00000183713 110 ntBASIC16.24■□□□□ 0.19
CirbpP60824 Mir3960-201ENSMUST00000198213 73 ntBASIC16.24■□□□□ 0.19
CirbpP60824 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CirbpP60824 Gm4799-201ENSMUST00000095396 657 ntBASIC16.24■□□□□ 0.19
CirbpP60824 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CirbpP60824 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CirbpP60824 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CirbpP60824 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CirbpP60824 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.22■□□□□ 0.19
CirbpP60824 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.22■□□□□ 0.19
CirbpP60824 Gm45364-201ENSMUST00000210883 159 ntBASIC16.22■□□□□ 0.19
CirbpP60824 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms