Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmga2P52927 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga2P52927 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmga2P52927 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.23■□□□□ 0.67
Hmga2P52927 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.23■□□□□ 0.67
Hmga2P52927 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.22■□□□□ 0.67
Hmga2P52927 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hmga2P52927 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmga2P52927 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.2■□□□□ 0.66
Hmga2P52927 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga2P52927 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmga2P52927 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.2■□□□□ 0.66
Hmga2P52927 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga2P52927 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmga2P52927 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmga2P52927 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hmga2P52927 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga2P52927 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmga2P52927 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga2P52927 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmga2P52927 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmga2P52927 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga2P52927 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmga2P52927 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga2P52927 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga2P52927 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmga2P52927 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga2P52927 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hmga2P52927 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.16■□□□□ 0.66
Hmga2P52927 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga2P52927 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Hmga2P52927 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmga2P52927 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmga2P52927 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
Hmga2P52927 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Hmga2P52927 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga2P52927 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hmga2P52927 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.12■□□□□ 0.65
Hmga2P52927 Gm37136-201ENSMUST00000194368 194 ntBASIC19.12■□□□□ 0.65
Hmga2P52927 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.12■□□□□ 0.65
Hmga2P52927 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga2P52927 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga2P52927 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmga2P52927 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmga2P52927 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmga2P52927 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hmga2P52927 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.09■□□□□ 0.65
Hmga2P52927 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmga2P52927 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hmga2P52927 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmga2P52927 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmga2P52927 Gm45855-201ENSMUST00000212546 880 ntBASIC19.08■□□□□ 0.64
Hmga2P52927 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Hmga2P52927 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.08■□□□□ 0.64
Hmga2P52927 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmga2P52927 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmga2P52927 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmga2P52927 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmga2P52927 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.07■□□□□ 0.64
Hmga2P52927 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hmga2P52927 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmga2P52927 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmga2P52927 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Hmga2P52927 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hmga2P52927 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmga2P52927 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmga2P52927 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Hmga2P52927 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmga2P52927 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmga2P52927 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Hmga2P52927 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hmga2P52927 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.05■□□□□ 0.64
Hmga2P52927 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmga2P52927 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmga2P52927 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmga2P52927 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hmga2P52927 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.04■□□□□ 0.64
Hmga2P52927 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms