Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccr1l1P51676 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccr1l1P51676 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccr1l1P51676 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.32■□□□□ 0.84
Ccr1l1P51676 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr1l1P51676 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr1l1P51676 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr1l1P51676 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr1l1P51676 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr1l1P51676 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr1l1P51676 Gm11175-201ENSMUST00000116172 543 ntBASIC20.3■□□□□ 0.84
Ccr1l1P51676 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccr1l1P51676 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr1l1P51676 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr1l1P51676 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr1l1P51676 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr1l1P51676 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccr1l1P51676 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr1l1P51676 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Ccr1l1P51676 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Ccr1l1P51676 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr1l1P51676 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr1l1P51676 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr1l1P51676 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccr1l1P51676 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.27■□□□□ 0.84
Ccr1l1P51676 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr1l1P51676 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr1l1P51676 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccr1l1P51676 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr1l1P51676 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccr1l1P51676 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr1l1P51676 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccr1l1P51676 Mir6538-201ENSMUST00000183713 110 ntBASIC20.26■□□□□ 0.83
Ccr1l1P51676 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr1l1P51676 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr1l1P51676 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccr1l1P51676 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccr1l1P51676 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.24■□□□□ 0.83
Ccr1l1P51676 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr1l1P51676 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr1l1P51676 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr1l1P51676 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccr1l1P51676 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccr1l1P51676 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr1l1P51676 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr1l1P51676 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccr1l1P51676 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.22■□□□□ 0.83
Ccr1l1P51676 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr1l1P51676 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.22■□□□□ 0.83
Ccr1l1P51676 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr1l1P51676 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccr1l1P51676 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccr1l1P51676 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccr1l1P51676 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccr1l1P51676 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccr1l1P51676 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1l1P51676 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1l1P51676 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.19■□□□□ 0.82
Ccr1l1P51676 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Gm44428-201ENSMUST00000204474 874 ntBASIC20.18■□□□□ 0.82
Ccr1l1P51676 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1l1P51676 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccr1l1P51676 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1l1P51676 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1l1P51676 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1l1P51676 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ccr1l1P51676 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1l1P51676 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ccr1l1P51676 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccr1l1P51676 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1l1P51676 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccr1l1P51676 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1l1P51676 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.15■□□□□ 0.82
Ccr1l1P51676 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 205.4 ms