Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.94■□□□□ 0.94
Sox6P40645 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox6P40645 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.93■□□□□ 0.94
Sox6P40645 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.93■□□□□ 0.94
Sox6P40645 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox6P40645 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox6P40645 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sox6P40645 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox6P40645 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox6P40645 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Sox6P40645 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.92■□□□□ 0.94
Sox6P40645 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox6P40645 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sox6P40645 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sox6P40645 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox6P40645 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sox6P40645 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sox6P40645 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
Sox6P40645 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.89■□□□□ 0.94
Sox6P40645 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.89■□□□□ 0.94
Sox6P40645 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox6P40645 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox6P40645 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox6P40645 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.89■□□□□ 0.93
Sox6P40645 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Sox6P40645 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sox6P40645 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sox6P40645 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox6P40645 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sox6P40645 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox6P40645 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox6P40645 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sox6P40645 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox6P40645 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox6P40645 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sox6P40645 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sox6P40645 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox6P40645 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox6P40645 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox6P40645 Gm11599-201ENSMUST00000118720 878 ntBASIC20.86■□□□□ 0.93
Sox6P40645 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox6P40645 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox6P40645 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sox6P40645 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sox6P40645 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.85■□□□□ 0.93
Sox6P40645 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sox6P40645 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox6P40645 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox6P40645 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox6P40645 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Sox6P40645 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox6P40645 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sox6P40645 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox6P40645 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox6P40645 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox6P40645 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox6P40645 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox6P40645 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox6P40645 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox6P40645 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox6P40645 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox6P40645 Gm37136-201ENSMUST00000194368 194 ntBASIC20.81■□□□□ 0.92
Sox6P40645 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox6P40645 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox6P40645 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox6P40645 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox6P40645 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sox6P40645 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox6P40645 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.79■□□□□ 0.92
Sox6P40645 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox6P40645 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox6P40645 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sox6P40645 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sox6P40645 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sox6P40645 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms