Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.61■□□□□ 0.73
P04224 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P04224 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04224 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04224 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
P04224 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04224 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04224 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.6■□□□□ 0.73
P04224 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.59■□□□□ 0.73
P04224 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.59■□□□□ 0.73
P04224 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
P04224 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04224 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
P04224 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P04224 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P04224 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P04224 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
P04224 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.57■□□□□ 0.72
P04224 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.57■□□□□ 0.72
P04224 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P04224 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P04224 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04224 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.56■□□□□ 0.72
P04224 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
P04224 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04224 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04224 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
P04224 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04224 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.55■□□□□ 0.72
P04224 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04224 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04224 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04224 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04224 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04224 Gm9397-201ENSMUST00000200125 605 ntBASIC19.54■□□□□ 0.72
P04224 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P04224 Gm24970-201ENSMUST00000175582 82 ntBASIC19.53■□□□□ 0.72
P04224 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04224 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04224 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04224 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04224 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04224 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04224 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04224 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
P04224 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04224 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
P04224 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
P04224 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
P04224 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
P04224 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04224 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
P04224 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04224 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.49■□□□□ 0.71
P04224 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P04224 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
P04224 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04224 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
P04224 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04224 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04224 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04224 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04224 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.48■□□□□ 0.71
P04224 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
P04224 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
P04224 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
P04224 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04224 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04224 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04224 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04224 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.46■□□□□ 0.71
P04224 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04224 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P04224 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
P04224 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P04224 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04224 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.45■□□□□ 0.7
P04224 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04224 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
P04224 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04224 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04224 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04224 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P04224 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04224 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms