Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
P04213 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
P04213 Gm7432-201ENSMUST00000210343 879 ntBASIC21.65■■□□□ 1.06
P04213 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.65■■□□□ 1.06
P04213 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
P04213 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
P04213 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
P04213 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
P04213 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
P04213 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.63■■□□□ 1.05
P04213 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
P04213 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
P04213 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
P04213 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P04213 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
P04213 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
P04213 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P04213 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
P04213 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.61■■□□□ 1.05
P04213 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
P04213 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.6■■□□□ 1.05
P04213 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.6■■□□□ 1.05
P04213 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04213 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P04213 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P04213 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
P04213 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
P04213 Gm11599-201ENSMUST00000118720 878 ntBASIC21.59■■□□□ 1.05
P04213 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
P04213 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P04213 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P04213 Gm45364-201ENSMUST00000210883 159 ntBASIC21.58■■□□□ 1.05
P04213 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
P04213 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P04213 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
P04213 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
P04213 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.57■■□□□ 1.04
P04213 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
P04213 Mir3960-201ENSMUST00000198213 73 ntBASIC21.57■■□□□ 1.04
P04213 Gm9812-201ENSMUST00000061934 968 ntBASIC21.57■■□□□ 1.04
P04213 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
P04213 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.57■■□□□ 1.04
P04213 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.56■■□□□ 1.04
P04213 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.56■■□□□ 1.04
P04213 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P04213 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04213 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
P04213 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
P04213 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
P04213 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04213 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04213 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.54■■□□□ 1.04
P04213 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P04213 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
P04213 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
P04213 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.54■■□□□ 1.04
P04213 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.54■■□□□ 1.04
P04213 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04213 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.53■■□□□ 1.04
P04213 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04213 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.53■■□□□ 1.04
P04213 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04213 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04213 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
P04213 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04213 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
P04213 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
P04213 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
P04213 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
P04213 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
P04213 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
P04213 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
P04213 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P04213 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.5■■□□□ 1.03
P04213 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.5■■□□□ 1.03
P04213 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
P04213 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04213 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P04213 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P04213 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
P04213 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
P04213 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.49■■□□□ 1.03
P04213 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
P04213 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P04213 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P04213 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
P04213 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.48■■□□□ 1.03
P04213 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
P04213 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P04213 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms