Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01788 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01788 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01788 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01788 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01788 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01788 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01788 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
P01788 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01788 Nkain2-201ENSMUST00000092602 558 ntBASIC17.76■□□□□ 0.43
P01788 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
P01788 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.75■□□□□ 0.43
P01788 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.75■□□□□ 0.43
P01788 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01788 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01788 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01788 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01788 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01788 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01788 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.74■□□□□ 0.43
P01788 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P01788 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P01788 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01788 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01788 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01788 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P01788 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01788 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01788 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01788 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01788 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01788 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P01788 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01788 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01788 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
P01788 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
P01788 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01788 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.7■□□□□ 0.42
P01788 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P01788 Gm37136-201ENSMUST00000194368 194 ntBASIC17.7■□□□□ 0.42
P01788 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.7■□□□□ 0.42
P01788 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01788 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01788 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.69■□□□□ 0.42
P01788 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.69■□□□□ 0.42
P01788 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01788 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P01788 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01788 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01788 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.68■□□□□ 0.42
P01788 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.68■□□□□ 0.42
P01788 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P01788 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01788 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.67■□□□□ 0.42
P01788 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01788 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P01788 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01788 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01788 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.66■□□□□ 0.42
P01788 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
P01788 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
P01788 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
P01788 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
P01788 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P01788 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P01788 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01788 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
P01788 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P01788 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P01788 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
P01788 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.62■□□□□ 0.41
P01788 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P01788 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01788 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P01788 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.61■□□□□ 0.41
P01788 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01788 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01788 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P01788 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01788 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P01788 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01788 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.59■□□□□ 0.41
P01788 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
P01788 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01788 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01788 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
P01788 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01788 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01788 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms