Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.14■■□□□ 1.45
Ttc3O88196 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ttc3O88196 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Ttc3O88196 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ttc3O88196 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ttc3O88196 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ttc3O88196 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Ttc3O88196 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.12■■□□□ 1.45
Ttc3O88196 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.12■■□□□ 1.45
Ttc3O88196 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Ttc3O88196 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ttc3O88196 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ttc3O88196 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ttc3O88196 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
Ttc3O88196 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ttc3O88196 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ttc3O88196 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ttc3O88196 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Ttc3O88196 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Ttc3O88196 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Ttc3O88196 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.08■■□□□ 1.45
Ttc3O88196 Gm5921-201ENSMUST00000075898 882 ntBASIC24.08■■□□□ 1.45
Ttc3O88196 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ttc3O88196 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ttc3O88196 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ttc3O88196 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ttc3O88196 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
Ttc3O88196 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ttc3O88196 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ttc3O88196 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ttc3O88196 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ttc3O88196 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ttc3O88196 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ttc3O88196 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.02■■□□□ 1.44
Ttc3O88196 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ttc3O88196 Gm5812-201ENSMUST00000061073 957 ntBASIC24.01■■□□□ 1.43
Ttc3O88196 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ttc3O88196 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ttc3O88196 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ttc3O88196 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ttc3O88196 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ttc3O88196 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24■■□□□ 1.43
Ttc3O88196 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ttc3O88196 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ttc3O88196 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ttc3O88196 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ttc3O88196 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ttc3O88196 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ttc3O88196 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.98■■□□□ 1.43
Ttc3O88196 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ttc3O88196 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.97■■□□□ 1.43
Ttc3O88196 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ttc3O88196 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ttc3O88196 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ttc3O88196 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ttc3O88196 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ttc3O88196 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ttc3O88196 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ttc3O88196 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ttc3O88196 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ttc3O88196 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ttc3O88196 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ttc3O88196 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ttc3O88196 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ttc3O88196 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.92■■□□□ 1.42
Ttc3O88196 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Ttc3O88196 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ttc3O88196 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ttc3O88196 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ttc3O88196 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ttc3O88196 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ttc3O88196 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ttc3O88196 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.9■■□□□ 1.42
Ttc3O88196 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.89■■□□□ 1.42
Ttc3O88196 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ttc3O88196 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
Ttc3O88196 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ttc3O88196 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.88■■□□□ 1.41
Ttc3O88196 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc3O88196 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc3O88196 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ttc3O88196 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ttc3O88196 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ttc3O88196 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms