Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf13O54965 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf13O54965 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf13O54965 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf13O54965 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf13O54965 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf13O54965 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf13O54965 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf13O54965 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Rnf13O54965 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf13O54965 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf13O54965 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf13O54965 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf13O54965 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rnf13O54965 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf13O54965 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.32■□□□□ 0.84
Rnf13O54965 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf13O54965 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rnf13O54965 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf13O54965 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Rnf13O54965 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf13O54965 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf13O54965 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf13O54965 Nkain2-201ENSMUST00000092602 558 ntBASIC20.31■□□□□ 0.84
Rnf13O54965 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf13O54965 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf13O54965 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rnf13O54965 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf13O54965 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf13O54965 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf13O54965 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf13O54965 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf13O54965 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf13O54965 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf13O54965 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf13O54965 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf13O54965 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.28■□□□□ 0.84
Rnf13O54965 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf13O54965 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf13O54965 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf13O54965 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf13O54965 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf13O54965 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf13O54965 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Rnf13O54965 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf13O54965 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf13O54965 Gm37136-201ENSMUST00000194368 194 ntBASIC20.26■□□□□ 0.83
Rnf13O54965 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf13O54965 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf13O54965 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf13O54965 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf13O54965 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf13O54965 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf13O54965 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf13O54965 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.24■□□□□ 0.83
Rnf13O54965 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.24■□□□□ 0.83
Rnf13O54965 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf13O54965 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf13O54965 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Rnf13O54965 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf13O54965 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf13O54965 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf13O54965 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf13O54965 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.23■□□□□ 0.83
Rnf13O54965 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.22■□□□□ 0.83
Rnf13O54965 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf13O54965 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf13O54965 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf13O54965 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf13O54965 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf13O54965 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf13O54965 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf13O54965 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf13O54965 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.2■□□□□ 0.82
Rnf13O54965 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf13O54965 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Rnf13O54965 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf13O54965 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf13O54965 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf13O54965 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.19■□□□□ 0.82
Rnf13O54965 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf13O54965 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf13O54965 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf13O54965 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf13O54965 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rnf13O54965 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf13O54965 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf13O54965 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms