Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DffbO54788 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffbO54788 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DffbO54788 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.23■□□□□ 0.67
DffbO54788 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.22■□□□□ 0.67
DffbO54788 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.22■□□□□ 0.67
DffbO54788 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffbO54788 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DffbO54788 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.21■□□□□ 0.67
DffbO54788 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.21■□□□□ 0.67
DffbO54788 Gm37136-201ENSMUST00000194368 194 ntBASIC19.21■□□□□ 0.67
DffbO54788 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.21■□□□□ 0.67
DffbO54788 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffbO54788 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DffbO54788 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffbO54788 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffbO54788 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
DffbO54788 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffbO54788 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DffbO54788 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffbO54788 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffbO54788 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DffbO54788 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DffbO54788 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DffbO54788 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DffbO54788 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DffbO54788 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DffbO54788 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DffbO54788 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DffbO54788 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DffbO54788 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DffbO54788 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DffbO54788 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DffbO54788 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DffbO54788 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.16■□□□□ 0.66
DffbO54788 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.16■□□□□ 0.66
DffbO54788 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DffbO54788 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DffbO54788 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DffbO54788 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DffbO54788 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DffbO54788 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DffbO54788 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DffbO54788 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DffbO54788 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DffbO54788 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.14■□□□□ 0.65
DffbO54788 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DffbO54788 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DffbO54788 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DffbO54788 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DffbO54788 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DffbO54788 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DffbO54788 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.13■□□□□ 0.65
DffbO54788 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DffbO54788 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DffbO54788 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
DffbO54788 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.12■□□□□ 0.65
DffbO54788 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.12■□□□□ 0.65
DffbO54788 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DffbO54788 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.11■□□□□ 0.65
DffbO54788 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
DffbO54788 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DffbO54788 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DffbO54788 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DffbO54788 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
DffbO54788 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DffbO54788 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DffbO54788 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DffbO54788 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DffbO54788 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DffbO54788 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DffbO54788 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.08■□□□□ 0.64
DffbO54788 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DffbO54788 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DffbO54788 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DffbO54788 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DffbO54788 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DffbO54788 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.07■□□□□ 0.64
DffbO54788 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DffbO54788 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms