Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps1O08983 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.59■□□□□ 0.89
Hps1O08983 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps1O08983 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps1O08983 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps1O08983 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hps1O08983 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Hps1O08983 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hps1O08983 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hps1O08983 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hps1O08983 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps1O08983 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps1O08983 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps1O08983 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps1O08983 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hps1O08983 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
Hps1O08983 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps1O08983 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.56■□□□□ 0.88
Hps1O08983 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.56■□□□□ 0.88
Hps1O08983 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hps1O08983 Particl-201ENSMUST00000205370 1560 ntBASIC20.56■□□□□ 0.88
Hps1O08983 Gm11175-201ENSMUST00000116172 543 ntBASIC20.56■□□□□ 0.88
Hps1O08983 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.56■□□□□ 0.88
Hps1O08983 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps1O08983 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hps1O08983 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hps1O08983 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Hps1O08983 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps1O08983 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps1O08983 Cap2-205ENSMUST00000225824 1634 ntBASIC20.54■□□□□ 0.88
Hps1O08983 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hps1O08983 Gm30023-201ENSMUST00000197970 889 ntBASIC20.54■□□□□ 0.88
Hps1O08983 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps1O08983 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps1O08983 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps1O08983 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps1O08983 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hps1O08983 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.52■□□□□ 0.88
Hps1O08983 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hps1O08983 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps1O08983 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps1O08983 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hps1O08983 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.51■□□□□ 0.87
Hps1O08983 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hps1O08983 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps1O08983 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps1O08983 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Hps1O08983 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps1O08983 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hps1O08983 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hps1O08983 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hps1O08983 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hps1O08983 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.48■□□□□ 0.87
Hps1O08983 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hps1O08983 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps1O08983 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hps1O08983 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hps1O08983 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hps1O08983 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.47■□□□□ 0.87
Hps1O08983 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hps1O08983 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hps1O08983 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hps1O08983 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hps1O08983 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hps1O08983 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hps1O08983 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hps1O08983 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hps1O08983 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hps1O08983 Gm6311-201ENSMUST00000073790 878 ntBASIC20.45■□□□□ 0.86
Hps1O08983 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hps1O08983 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hps1O08983 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hps1O08983 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hps1O08983 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Hps1O08983 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hps1O08983 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hps1O08983 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hps1O08983 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.43■□□□□ 0.86
Hps1O08983 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hps1O08983 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hps1O08983 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hps1O08983 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hps1O08983 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hps1O08983 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hps1O08983 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hps1O08983 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hps1O08983 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hps1O08983 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hps1O08983 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hps1O08983 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms