Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rfx8D3YU81 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx8D3YU81 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx8D3YU81 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx8D3YU81 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx8D3YU81 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.78■■□□□ 1.4
Rfx8D3YU81 Terc-201ENSMUST00000082862 423 ntBASIC23.78■■□□□ 1.4
Rfx8D3YU81 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.78■■□□□ 1.4
Rfx8D3YU81 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Rfx8D3YU81 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Rfx8D3YU81 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx8D3YU81 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx8D3YU81 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx8D3YU81 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx8D3YU81 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rfx8D3YU81 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rfx8D3YU81 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rfx8D3YU81 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rfx8D3YU81 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rfx8D3YU81 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfx8D3YU81 Scarna2-201ENSMUST00000157560 414 ntBASIC23.73■■□□□ 1.39
Rfx8D3YU81 Gm9806-201ENSMUST00000051080 552 ntBASIC23.73■■□□□ 1.39
Rfx8D3YU81 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rfx8D3YU81 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rfx8D3YU81 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx8D3YU81 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Rfx8D3YU81 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx8D3YU81 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx8D3YU81 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx8D3YU81 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rfx8D3YU81 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.7■■□□□ 1.39
Rfx8D3YU81 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.7■■□□□ 1.38
Rfx8D3YU81 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rfx8D3YU81 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.7■■□□□ 1.38
Rfx8D3YU81 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.69■■□□□ 1.38
Rfx8D3YU81 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfx8D3YU81 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rfx8D3YU81 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx8D3YU81 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx8D3YU81 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx8D3YU81 Gm11687-201ENSMUST00000118911 886 ntBASIC23.68■■□□□ 1.38
Rfx8D3YU81 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx8D3YU81 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx8D3YU81 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.67■■□□□ 1.38
Rfx8D3YU81 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfx8D3YU81 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rfx8D3YU81 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfx8D3YU81 Gm16437-201ENSMUST00000025669 507 ntBASIC23.65■■□□□ 1.38
Rfx8D3YU81 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rfx8D3YU81 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rfx8D3YU81 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Rfx8D3YU81 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rfx8D3YU81 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfx8D3YU81 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx8D3YU81 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.63■■□□□ 1.37
Rfx8D3YU81 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx8D3YU81 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx8D3YU81 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx8D3YU81 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx8D3YU81 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx8D3YU81 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx8D3YU81 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Rfx8D3YU81 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx8D3YU81 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rfx8D3YU81 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rfx8D3YU81 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfx8D3YU81 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rfx8D3YU81 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.61■■□□□ 1.37
Rfx8D3YU81 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfx8D3YU81 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfx8D3YU81 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Rfx8D3YU81 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
Rfx8D3YU81 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
Rfx8D3YU81 Gm11175-201ENSMUST00000116172 543 ntBASIC23.59■■□□□ 1.37
Rfx8D3YU81 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfx8D3YU81 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfx8D3YU81 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rfx8D3YU81 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.59■■□□□ 1.37
Rfx8D3YU81 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rfx8D3YU81 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Rfx8D3YU81 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfx8D3YU81 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfx8D3YU81 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.58■■□□□ 1.37
Rfx8D3YU81 Mir6538-201ENSMUST00000183713 110 ntBASIC23.58■■□□□ 1.37
Rfx8D3YU81 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Rfx8D3YU81 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Rfx8D3YU81 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms