Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Tmf1B9EKI3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Tmf1B9EKI3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Tmf1B9EKI3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Tmf1B9EKI3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Tmf1B9EKI3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Tmf1B9EKI3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Tmf1B9EKI3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tmf1B9EKI3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tmf1B9EKI3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Tmf1B9EKI3 Gm44428-201ENSMUST00000204474 874 ntBASIC30.74■■■□□ 2.51
Tmf1B9EKI3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.74■■■□□ 2.51
Tmf1B9EKI3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tmf1B9EKI3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tmf1B9EKI3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.73■■■□□ 2.51
Tmf1B9EKI3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Tmf1B9EKI3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tmf1B9EKI3 Gm14523-201ENSMUST00000117260 558 ntBASIC30.72■■■□□ 2.51
Tmf1B9EKI3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tmf1B9EKI3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.71■■■□□ 2.51
Tmf1B9EKI3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Tmf1B9EKI3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Tmf1B9EKI3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tmf1B9EKI3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.69■■■□□ 2.5
Tmf1B9EKI3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Tmf1B9EKI3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmf1B9EKI3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC30.68■■■□□ 2.5
Tmf1B9EKI3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.68■■■□□ 2.5
Tmf1B9EKI3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmf1B9EKI3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tmf1B9EKI3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tmf1B9EKI3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30.66■■■□□ 2.5
Tmf1B9EKI3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tmf1B9EKI3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Gm7332-201ENSMUST00000118351 454 ntBASIC30.65■■■□□ 2.5
Tmf1B9EKI3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Tmf1B9EKI3 Gm42699-201ENSMUST00000198104 1657 ntBASIC30.64■■■□□ 2.5
Tmf1B9EKI3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tmf1B9EKI3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tmf1B9EKI3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tmf1B9EKI3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tmf1B9EKI3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
Tmf1B9EKI3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Tmf1B9EKI3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Tmf1B9EKI3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tmf1B9EKI3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tmf1B9EKI3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tmf1B9EKI3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tmf1B9EKI3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tmf1B9EKI3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tmf1B9EKI3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Tmf1B9EKI3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tmf1B9EKI3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.58■■■□□ 2.49
Tmf1B9EKI3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tmf1B9EKI3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC30.58■■■□□ 2.49
Tmf1B9EKI3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Tmf1B9EKI3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Tmf1B9EKI3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Tmf1B9EKI3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Tmf1B9EKI3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Tmf1B9EKI3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Tmf1B9EKI3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Tmf1B9EKI3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC30.56■■■□□ 2.48
Tmf1B9EKI3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tmf1B9EKI3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
Tmf1B9EKI3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tmf1B9EKI3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30.54■■■□□ 2.48
Tmf1B9EKI3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.54■■■□□ 2.48
Tmf1B9EKI3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Tmf1B9EKI3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Tmf1B9EKI3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Tmf1B9EKI3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Tmf1B9EKI3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmf1B9EKI3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmf1B9EKI3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmf1B9EKI3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmf1B9EKI3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms