Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.65■□□□□ 0.74
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4799-201ENSMUST00000095396 657 ntBASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.61■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 171.2 ms