Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.93■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.92■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.91■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.9■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.9■■□□□ 1.1
Tcrg-V3A0A0G2JEW2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.85■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.85■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.84■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.84■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.83■■□□□ 1.09
Tcrg-V3A0A0G2JEW2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.82■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.82■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.81■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.79■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.77■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Tcrg-V3A0A0G2JEW2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.75■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.73■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.71■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.71■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tcrg-V3A0A0G2JEW2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Gm10420-201ENSMUST00000121713 882 ntBASIC21.69■■□□□ 1.06
Tcrg-V3A0A0G2JEW2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms