Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-1A0A0G2JEV5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-1A0A0G2JEV5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-1A0A0G2JEV5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-1A0A0G2JEV5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav7-1A0A0G2JEV5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav7-1A0A0G2JEV5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-1A0A0G2JEV5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-1A0A0G2JEV5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-1A0A0G2JEV5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-1A0A0G2JEV5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-1A0A0G2JEV5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav7-1A0A0G2JEV5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-1A0A0G2JEV5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-1A0A0G2JEV5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav7-1A0A0G2JEV5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-1A0A0G2JEV5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-1A0A0G2JEV5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-1A0A0G2JEV5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-1A0A0G2JEV5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-1A0A0G2JEV5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-1A0A0G2JEV5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav7-1A0A0G2JEV5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-1A0A0G2JEV5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-1A0A0G2JEV5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-1A0A0G2JEV5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-1A0A0G2JEV5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav7-1A0A0G2JEV5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav7-1A0A0G2JEV5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-1A0A0G2JEV5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-1A0A0G2JEV5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-1A0A0G2JEV5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-1A0A0G2JEV5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-1A0A0G2JEV5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-1A0A0G2JEV5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-1A0A0G2JEV5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-1A0A0G2JEV5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-1A0A0G2JEV5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Trav7-1A0A0G2JEV5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-1A0A0G2JEV5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav7-1A0A0G2JEV5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms