Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv30A0A0B4J1P1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Scarna2-201ENSMUST00000157560 414 ntBASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv30A0A0B4J1P1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Gm9806-201ENSMUST00000051080 552 ntBASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv30A0A0B4J1P1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trbv30A0A0B4J1P1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Gm11687-201ENSMUST00000118911 886 ntBASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv30A0A0B4J1P1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Gm16437-201ENSMUST00000025669 507 ntBASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv30A0A0B4J1P1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.83■□□□□ 0.28
Trbv30A0A0B4J1P1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv30A0A0B4J1P1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv30A0A0B4J1P1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv30A0A0B4J1P1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv30A0A0B4J1P1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.81■□□□□ 0.28
Trbv30A0A0B4J1P1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv30A0A0B4J1P1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trbv30A0A0B4J1P1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv30A0A0B4J1P1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv30A0A0B4J1P1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv30A0A0B4J1P1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv30A0A0B4J1P1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv30A0A0B4J1P1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv30A0A0B4J1P1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv30A0A0B4J1P1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv30A0A0B4J1P1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trbv30A0A0B4J1P1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trbv30A0A0B4J1P1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.77■□□□□ 0.27
Trbv30A0A0B4J1P1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv30A0A0B4J1P1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv30A0A0B4J1P1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv30A0A0B4J1P1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Trbv30A0A0B4J1P1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv30A0A0B4J1P1 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv30A0A0B4J1P1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv30A0A0B4J1P1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Trbv30A0A0B4J1P1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbv30A0A0B4J1P1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv30A0A0B4J1P1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv30A0A0B4J1P1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms