Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Scarna2-201ENSMUST00000157560 414 ntBASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms