Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sirpb1bA0A0A6YXN8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.65■□□□□ 0.74
Sirpb1bA0A0A6YXN8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Scarna2-201ENSMUST00000157560 414 ntBASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.61■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.6■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1bA0A0A6YXN8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.58■□□□□ 0.73
Sirpb1bA0A0A6YXN8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1bA0A0A6YXN8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms