Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Trav16A0A075B653 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16A0A075B653 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16A0A075B653 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav16A0A075B653 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav16A0A075B653 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Trav16A0A075B653 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav16A0A075B653 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16A0A075B653 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16A0A075B653 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16A0A075B653 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.33■□□□□ 0.36
Trav16A0A075B653 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16A0A075B653 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.32■□□□□ 0.36
Trav16A0A075B653 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16A0A075B653 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Zfp131-205ENSMUST00000223812 663 ntBASIC17.31■□□□□ 0.36
Trav16A0A075B653 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Trav16A0A075B653 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav16A0A075B653 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav16A0A075B653 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav16A0A075B653 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.3■□□□□ 0.36
Trav16A0A075B653 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav16A0A075B653 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav16A0A075B653 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Trav16A0A075B653 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16A0A075B653 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16A0A075B653 Gm24970-201ENSMUST00000175582 82 ntBASIC17.28■□□□□ 0.36
Trav16A0A075B653 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav16A0A075B653 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.28■□□□□ 0.36
Trav16A0A075B653 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16A0A075B653 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav16A0A075B653 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav16A0A075B653 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16A0A075B653 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16A0A075B653 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.27■□□□□ 0.35
Trav16A0A075B653 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav16A0A075B653 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav16A0A075B653 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav16A0A075B653 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav16A0A075B653 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav16A0A075B653 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16A0A075B653 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16A0A075B653 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16A0A075B653 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.24■□□□□ 0.35
Trav16A0A075B653 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav16A0A075B653 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Gm9397-201ENSMUST00000200125 605 ntBASIC17.23■□□□□ 0.35
Trav16A0A075B653 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav16A0A075B653 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16A0A075B653 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16A0A075B653 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Trav16A0A075B653 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16A0A075B653 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.22■□□□□ 0.35
Trav16A0A075B653 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16A0A075B653 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16A0A075B653 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav16A0A075B653 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16A0A075B653 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 174.8 ms