Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 Gm15500-202ENSMUST00000071641 1019 ntBASIC22.91■■□□□ 1.26
NclP09405 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
NclP09405 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NclP09405 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Gm5648-201ENSMUST00000122244 1587 ntBASIC22.9■■□□□ 1.26
NclP09405 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Gm11453-201ENSMUST00000117318 1007 ntBASIC22.9■■□□□ 1.26
NclP09405 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
NclP09405 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC22.9■■□□□ 1.26
NclP09405 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
NclP09405 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NclP09405 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
NclP09405 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
NclP09405 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NclP09405 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
NclP09405 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
NclP09405 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NclP09405 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
NclP09405 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NclP09405 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
NclP09405 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NclP09405 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NclP09405 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NclP09405 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.89■■□□□ 1.25
NclP09405 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NclP09405 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NclP09405 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC22.88■■□□□ 1.25
NclP09405 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC22.88■■□□□ 1.25
NclP09405 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC22.88■■□□□ 1.25
NclP09405 Gm44492-201ENSMUST00000197012 141 ntBASIC22.88■■□□□ 1.25
NclP09405 AC151286.1-201ENSMUST00000198489 145 ntBASIC22.88■■□□□ 1.25
NclP09405 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NclP09405 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NclP09405 AC069562.2-201ENSMUST00000224644 2146 ntBASIC22.88■■□□□ 1.25
NclP09405 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
NclP09405 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC22.87■■□□□ 1.25
NclP09405 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NclP09405 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC22.87■■□□□ 1.25
NclP09405 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC22.87■■□□□ 1.25
NclP09405 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC22.87■■□□□ 1.25
NclP09405 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NclP09405 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NclP09405 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NclP09405 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
NclP09405 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
NclP09405 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NclP09405 AC119177.1-201ENSMUST00000227647 1332 ntBASIC22.86■■□□□ 1.25
NclP09405 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC22.86■■□□□ 1.25
NclP09405 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
NclP09405 Gm8318-201ENSMUST00000182954 872 ntBASIC22.86■■□□□ 1.25
NclP09405 Gm17968-201ENSMUST00000194902 784 ntBASIC22.86■■□□□ 1.25
NclP09405 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
NclP09405 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NclP09405 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms