Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC23■■□□□ 1.27
NclP09405 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC23■■□□□ 1.27
NclP09405 Gm7286-201ENSMUST00000182691 1007 ntBASIC23■■□□□ 1.27
NclP09405 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
NclP09405 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC23■■□□□ 1.27
NclP09405 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NclP09405 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NclP09405 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC22.99■■□□□ 1.27
NclP09405 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
NclP09405 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Gm38318-201ENSMUST00000195769 1706 ntBASIC22.99■■□□□ 1.27
NclP09405 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC22.99■■□□□ 1.27
NclP09405 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC22.99■■□□□ 1.27
NclP09405 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NclP09405 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC22.99■■□□□ 1.27
NclP09405 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NclP09405 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
NclP09405 Gm23935-201ENSMUST00000102303 57 ntBASIC22.98■■□□□ 1.27
NclP09405 Gm24270-201ENSMUST00000102326 57 ntBASIC22.98■■□□□ 1.27
NclP09405 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Gm4913-201ENSMUST00000117075 1290 ntBASIC22.98■■□□□ 1.27
NclP09405 Gm24245-201ENSMUST00000157318 57 ntBASIC22.98■■□□□ 1.27
NclP09405 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC22.98■■□□□ 1.27
NclP09405 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NclP09405 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Gm43072-201ENSMUST00000200283 1671 ntBASIC22.97■■□□□ 1.27
NclP09405 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NclP09405 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC22.97■■□□□ 1.27
NclP09405 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC22.97■■□□□ 1.27
NclP09405 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
NclP09405 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC22.97■■□□□ 1.27
NclP09405 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 AC159295.1-201ENSMUST00000225326 940 ntBASIC22.97■■□□□ 1.27
NclP09405 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
NclP09405 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC22.97■■□□□ 1.27
NclP09405 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NclP09405 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC22.96■■□□□ 1.27
NclP09405 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
NclP09405 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
NclP09405 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
NclP09405 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NclP09405 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
NclP09405 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms