Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29.35■■■□□ 2.29
Hdac6Q9Z2V5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
Hdac6Q9Z2V5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hdac6Q9Z2V5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hdac6Q9Z2V5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hdac6Q9Z2V5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hdac6Q9Z2V5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hdac6Q9Z2V5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hdac6Q9Z2V5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Hdac6Q9Z2V5 Gm5522-201ENSMUST00000189483 1242 ntBASIC29.33■■■□□ 2.29
Hdac6Q9Z2V5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Hdac6Q9Z2V5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Hdac6Q9Z2V5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Hdac6Q9Z2V5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hdac6Q9Z2V5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Hdac6Q9Z2V5 Gm15039-201ENSMUST00000118914 875 ntBASIC29.31■■■□□ 2.28
Hdac6Q9Z2V5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
Hdac6Q9Z2V5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.29■■■□□ 2.28
Hdac6Q9Z2V5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Hdac6Q9Z2V5 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.28■■■□□ 2.28
Hdac6Q9Z2V5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Hdac6Q9Z2V5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.26■■■□□ 2.27
Hdac6Q9Z2V5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Hdac6Q9Z2V5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Hdac6Q9Z2V5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Hdac6Q9Z2V5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.25■■■□□ 2.27
Hdac6Q9Z2V5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hdac6Q9Z2V5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Hdac6Q9Z2V5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Hdac6Q9Z2V5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Hdac6Q9Z2V5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Hdac6Q9Z2V5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.24■■■□□ 2.27
Hdac6Q9Z2V5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Hdac6Q9Z2V5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC29.23■■■□□ 2.27
Hdac6Q9Z2V5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.22■■■□□ 2.27
Hdac6Q9Z2V5 Gm13238-201ENSMUST00000117655 780 ntBASIC29.22■■■□□ 2.27
Hdac6Q9Z2V5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hdac6Q9Z2V5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hdac6Q9Z2V5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hdac6Q9Z2V5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Hdac6Q9Z2V5 Gm43592-201ENSMUST00000196922 1165 ntBASIC29.21■■■□□ 2.27
Hdac6Q9Z2V5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Hdac6Q9Z2V5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Hdac6Q9Z2V5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.2■■■□□ 2.26
Hdac6Q9Z2V5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Hdac6Q9Z2V5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC29.2■■■□□ 2.26
Hdac6Q9Z2V5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.19■■■□□ 2.26
Hdac6Q9Z2V5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Hdac6Q9Z2V5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
Hdac6Q9Z2V5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Hdac6Q9Z2V5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Hdac6Q9Z2V5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Hdac6Q9Z2V5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC29.17■■■□□ 2.26
Hdac6Q9Z2V5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Hdac6Q9Z2V5 Gm4419-202ENSMUST00000226239 1431 ntBASIC29.17■■■□□ 2.26
Hdac6Q9Z2V5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Hdac6Q9Z2V5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 Gm43566-201ENSMUST00000196851 808 ntBASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 AC093043.1-201ENSMUST00000226700 898 ntBASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Hdac6Q9Z2V5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Hdac6Q9Z2V5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Hdac6Q9Z2V5 Nsd1-203ENSMUST00000224156 1149 ntBASIC29.14■■■□□ 2.26
Hdac6Q9Z2V5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hdac6Q9Z2V5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Hdac6Q9Z2V5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.13■■■□□ 2.25
Hdac6Q9Z2V5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hdac6Q9Z2V5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC29.12■■■□□ 2.25
Hdac6Q9Z2V5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
Hdac6Q9Z2V5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Hdac6Q9Z2V5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hdac6Q9Z2V5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hdac6Q9Z2V5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Hdac6Q9Z2V5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Hdac6Q9Z2V5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Hdac6Q9Z2V5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Hdac6Q9Z2V5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Hdac6Q9Z2V5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Hdac6Q9Z2V5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC29.07■■■□□ 2.24
Hdac6Q9Z2V5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC29.07■■■□□ 2.24
Hdac6Q9Z2V5 Amer2-203ENSMUST00000225247 2662 ntBASIC29.07■■■□□ 2.24
Hdac6Q9Z2V5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Hdac6Q9Z2V5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Hdac6Q9Z2V5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Hdac6Q9Z2V5 Gm15820-201ENSMUST00000201566 728 ntBASIC29.06■■■□□ 2.24
Hdac6Q9Z2V5 Gm45444-201ENSMUST00000211394 898 ntBASIC29.06■■■□□ 2.24
Hdac6Q9Z2V5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Hdac6Q9Z2V5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29.05■■■□□ 2.24
Hdac6Q9Z2V5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.05■■■□□ 2.24
Hdac6Q9Z2V5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Hdac6Q9Z2V5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Hdac6Q9Z2V5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.04■■■□□ 2.24
Hdac6Q9Z2V5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Hdac6Q9Z2V5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
Hdac6Q9Z2V5 AC117769.4-201ENSMUST00000225679 685 ntBASIC29.03■■■□□ 2.24
Hdac6Q9Z2V5 Rps24-207ENSMUST00000224568 714 ntBASIC29.01■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms