Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbfox1Q9JJ43 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbfox1Q9JJ43 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbfox1Q9JJ43 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.25■□□□□ 0.67
Rbfox1Q9JJ43 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbfox1Q9JJ43 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbfox1Q9JJ43 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbfox1Q9JJ43 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.23■□□□□ 0.67
Rbfox1Q9JJ43 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox1Q9JJ43 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox1Q9JJ43 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox1Q9JJ43 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox1Q9JJ43 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.22■□□□□ 0.67
Rbfox1Q9JJ43 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbfox1Q9JJ43 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbfox1Q9JJ43 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rbfox1Q9JJ43 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbfox1Q9JJ43 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rbfox1Q9JJ43 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbfox1Q9JJ43 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbfox1Q9JJ43 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.19■□□□□ 0.66
Rbfox1Q9JJ43 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox1Q9JJ43 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox1Q9JJ43 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rbfox1Q9JJ43 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox1Q9JJ43 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox1Q9JJ43 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbfox1Q9JJ43 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbfox1Q9JJ43 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbfox1Q9JJ43 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Rbfox1Q9JJ43 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbfox1Q9JJ43 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.16■□□□□ 0.66
Rbfox1Q9JJ43 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbfox1Q9JJ43 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.15■□□□□ 0.66
Rbfox1Q9JJ43 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbfox1Q9JJ43 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Rbfox1Q9JJ43 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.15■□□□□ 0.66
Rbfox1Q9JJ43 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbfox1Q9JJ43 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.14■□□□□ 0.65
Rbfox1Q9JJ43 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbfox1Q9JJ43 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbfox1Q9JJ43 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbfox1Q9JJ43 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox1Q9JJ43 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox1Q9JJ43 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rbfox1Q9JJ43 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rbfox1Q9JJ43 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbfox1Q9JJ43 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms