Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vmn1r54Q9EPB8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vmn1r54Q9EPB8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.39■□□□□ 0.54
Vmn1r54Q9EPB8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r54Q9EPB8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.39■□□□□ 0.53
Vmn1r54Q9EPB8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r54Q9EPB8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Gm8503-201ENSMUST00000118131 455 ntBASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.38■□□□□ 0.53
Vmn1r54Q9EPB8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r54Q9EPB8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r54Q9EPB8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r54Q9EPB8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.35■□□□□ 0.53
Vmn1r54Q9EPB8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.35■□□□□ 0.53
Vmn1r54Q9EPB8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r54Q9EPB8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r54Q9EPB8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r54Q9EPB8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r54Q9EPB8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r54Q9EPB8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.33■□□□□ 0.53
Vmn1r54Q9EPB8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r54Q9EPB8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r54Q9EPB8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r54Q9EPB8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r54Q9EPB8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r54Q9EPB8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r54Q9EPB8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r54Q9EPB8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r54Q9EPB8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r54Q9EPB8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vmn1r54Q9EPB8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r54Q9EPB8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Vmn1r54Q9EPB8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r54Q9EPB8 Particl-201ENSMUST00000205370 1560 ntBASIC18.27■□□□□ 0.52
Vmn1r54Q9EPB8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.27■□□□□ 0.52
Vmn1r54Q9EPB8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r54Q9EPB8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vmn1r54Q9EPB8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r54Q9EPB8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r54Q9EPB8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms