Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hmg20aQ9DC33 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.73■□□□□ 0.91
Hmg20aQ9DC33 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20aQ9DC33 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20aQ9DC33 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmg20aQ9DC33 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmg20aQ9DC33 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20aQ9DC33 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20aQ9DC33 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmg20aQ9DC33 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.91
Hmg20aQ9DC33 Gm24804-201ENSMUST00000174982 85 ntBASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmg20aQ9DC33 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20aQ9DC33 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20aQ9DC33 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hmg20aQ9DC33 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hmg20aQ9DC33 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20aQ9DC33 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20aQ9DC33 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20aQ9DC33 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20aQ9DC33 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20aQ9DC33 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20aQ9DC33 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hmg20aQ9DC33 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20aQ9DC33 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20aQ9DC33 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20aQ9DC33 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20aQ9DC33 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20aQ9DC33 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.64■□□□□ 0.9
Hmg20aQ9DC33 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Hmg20aQ9DC33 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20aQ9DC33 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20aQ9DC33 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20aQ9DC33 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20aQ9DC33 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20aQ9DC33 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hmg20aQ9DC33 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.62■□□□□ 0.89
Hmg20aQ9DC33 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Hmg20aQ9DC33 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20aQ9DC33 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20aQ9DC33 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20aQ9DC33 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20aQ9DC33 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20aQ9DC33 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Notumos-201ENSMUST00000151998 2659 ntBASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
Hmg20aQ9DC33 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20aQ9DC33 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hmg20aQ9DC33 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hmg20aQ9DC33 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Hmg20aQ9DC33 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20aQ9DC33 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Gm16148-201ENSMUST00000119653 893 ntBASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms