Protein–RNA interactions for Protein: Q9D548

Zcchc13, Cellular nucleic acid binding protein 2, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc13Q9D548 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Zcchc13Q9D548 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Zcchc13Q9D548 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Zcchc13Q9D548 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zcchc13Q9D548 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Gm9812-201ENSMUST00000061934 968 ntBASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.41□□□□□ -0.1
Zcchc13Q9D548 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.4□□□□□ -0.1
Zcchc13Q9D548 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.4□□□□□ -0.1
Zcchc13Q9D548 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.4□□□□□ -0.1
Zcchc13Q9D548 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.4□□□□□ -0.1
Zcchc13Q9D548 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Zcchc13Q9D548 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zcchc13Q9D548 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Zcchc13Q9D548 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.39□□□□□ -0.11
Zcchc13Q9D548 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.39□□□□□ -0.11
Zcchc13Q9D548 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc13Q9D548 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc13Q9D548 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc13Q9D548 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc13Q9D548 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Gm45364-201ENSMUST00000210883 159 ntBASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc13Q9D548 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zcchc13Q9D548 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.34□□□□□ -0.11
Zcchc13Q9D548 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.34□□□□□ -0.11
Zcchc13Q9D548 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc13Q9D548 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc13Q9D548 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zcchc13Q9D548 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc13Q9D548 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.32□□□□□ -0.12
Zcchc13Q9D548 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc13Q9D548 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc13Q9D548 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.32□□□□□ -0.12
Zcchc13Q9D548 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc13Q9D548 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc13Q9D548 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Zcchc13Q9D548 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Zcchc13Q9D548 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Zcchc13Q9D548 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Zcchc13Q9D548 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Zcchc13Q9D548 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Terc-201ENSMUST00000082862 423 ntBASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Zcchc13Q9D548 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Zcchc13Q9D548 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.28□□□□□ -0.12
Zcchc13Q9D548 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Zcchc13Q9D548 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc13Q9D548 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc13Q9D548 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc13Q9D548 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc13Q9D548 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.27□□□□□ -0.13
Zcchc13Q9D548 Gm6311-201ENSMUST00000073790 878 ntBASIC14.27□□□□□ -0.13
Zcchc13Q9D548 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc13Q9D548 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms