Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nck1Q99M51 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nck1Q99M51 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nck1Q99M51 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nck1Q99M51 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nck1Q99M51 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nck1Q99M51 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nck1Q99M51 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Nck1Q99M51 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nck1Q99M51 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nck1Q99M51 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nck1Q99M51 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nck1Q99M51 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nck1Q99M51 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Nck1Q99M51 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nck1Q99M51 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nck1Q99M51 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nck1Q99M51 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.63■■□□□ 1.05
Nck1Q99M51 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nck1Q99M51 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nck1Q99M51 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nck1Q99M51 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nck1Q99M51 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nck1Q99M51 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nck1Q99M51 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.61■■□□□ 1.05
Nck1Q99M51 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Nck1Q99M51 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Nck1Q99M51 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Nck1Q99M51 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.61■■□□□ 1.05
Nck1Q99M51 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.61■■□□□ 1.05
Nck1Q99M51 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nck1Q99M51 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.61■■□□□ 1.05
Nck1Q99M51 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nck1Q99M51 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Nck1Q99M51 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nck1Q99M51 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nck1Q99M51 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nck1Q99M51 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Nck1Q99M51 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nck1Q99M51 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nck1Q99M51 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nck1Q99M51 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nck1Q99M51 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nck1Q99M51 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.57■■□□□ 1.04
Nck1Q99M51 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nck1Q99M51 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nck1Q99M51 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nck1Q99M51 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nck1Q99M51 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nck1Q99M51 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Nck1Q99M51 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nck1Q99M51 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nck1Q99M51 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Nck1Q99M51 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nck1Q99M51 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nck1Q99M51 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nck1Q99M51 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nck1Q99M51 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nck1Q99M51 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Nck1Q99M51 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nck1Q99M51 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.51■■□□□ 1.03
Nck1Q99M51 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nck1Q99M51 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nck1Q99M51 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nck1Q99M51 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nck1Q99M51 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nck1Q99M51 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Nck1Q99M51 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.5■■□□□ 1.03
Nck1Q99M51 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nck1Q99M51 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.5■■□□□ 1.03
Nck1Q99M51 Gm45855-201ENSMUST00000212546 880 ntBASIC21.5■■□□□ 1.03
Nck1Q99M51 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nck1Q99M51 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nck1Q99M51 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nck1Q99M51 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nck1Q99M51 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nck1Q99M51 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nck1Q99M51 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Nck1Q99M51 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.46■■□□□ 1.03
Nck1Q99M51 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nck1Q99M51 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nck1Q99M51 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms