Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgc3Q91XX1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgc3Q91XX1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgc3Q91XX1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgc3Q91XX1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhgc3Q91XX1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhgc3Q91XX1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhgc3Q91XX1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.44■■□□□ 1.02
Pcdhgc3Q91XX1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgc3Q91XX1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgc3Q91XX1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgc3Q91XX1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgc3Q91XX1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgc3Q91XX1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgc3Q91XX1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgc3Q91XX1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.42■■□□□ 1.02
Pcdhgc3Q91XX1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgc3Q91XX1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgc3Q91XX1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgc3Q91XX1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgc3Q91XX1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhgc3Q91XX1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.39■■□□□ 1.02
Pcdhgc3Q91XX1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgc3Q91XX1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Pcdhgc3Q91XX1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgc3Q91XX1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhgc3Q91XX1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgc3Q91XX1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgc3Q91XX1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgc3Q91XX1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgc3Q91XX1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgc3Q91XX1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhgc3Q91XX1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc3Q91XX1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc3Q91XX1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhgc3Q91XX1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc3Q91XX1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc3Q91XX1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.33■■□□□ 1.01
Pcdhgc3Q91XX1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc3Q91XX1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc3Q91XX1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc3Q91XX1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc3Q91XX1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc3Q91XX1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc3Q91XX1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.32■■□□□ 1
Pcdhgc3Q91XX1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.32■■□□□ 1
Pcdhgc3Q91XX1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc3Q91XX1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Pcdhgc3Q91XX1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhgc3Q91XX1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc3Q91XX1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhgc3Q91XX1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc3Q91XX1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pcdhgc3Q91XX1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc3Q91XX1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc3Q91XX1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhgc3Q91XX1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms