Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc65Q8VHI7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc65Q8VHI7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc65Q8VHI7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc65Q8VHI7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc65Q8VHI7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc65Q8VHI7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc65Q8VHI7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc65Q8VHI7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc65Q8VHI7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc65Q8VHI7 Gm4799-201ENSMUST00000095396 657 ntBASIC23.83■■□□□ 1.41
Ccdc65Q8VHI7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc65Q8VHI7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc65Q8VHI7 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.82■■□□□ 1.4
Ccdc65Q8VHI7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc65Q8VHI7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.8■■□□□ 1.4
Ccdc65Q8VHI7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc65Q8VHI7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc65Q8VHI7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc65Q8VHI7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc65Q8VHI7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc65Q8VHI7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc65Q8VHI7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc65Q8VHI7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc65Q8VHI7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.78■■□□□ 1.4
Ccdc65Q8VHI7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ccdc65Q8VHI7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc65Q8VHI7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc65Q8VHI7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.77■■□□□ 1.4
Ccdc65Q8VHI7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.76■■□□□ 1.39
Ccdc65Q8VHI7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.76■■□□□ 1.39
Ccdc65Q8VHI7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc65Q8VHI7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc65Q8VHI7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc65Q8VHI7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc65Q8VHI7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc65Q8VHI7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc65Q8VHI7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc65Q8VHI7 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.75■■□□□ 1.39
Ccdc65Q8VHI7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc65Q8VHI7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc65Q8VHI7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc65Q8VHI7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc65Q8VHI7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc65Q8VHI7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc65Q8VHI7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc65Q8VHI7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc65Q8VHI7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc65Q8VHI7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc65Q8VHI7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc65Q8VHI7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc65Q8VHI7 Mir3960-201ENSMUST00000198213 73 ntBASIC23.69■■□□□ 1.38
Ccdc65Q8VHI7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc65Q8VHI7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc65Q8VHI7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc65Q8VHI7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.69■■□□□ 1.38
Ccdc65Q8VHI7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc65Q8VHI7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc65Q8VHI7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc65Q8VHI7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc65Q8VHI7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc65Q8VHI7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc65Q8VHI7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ccdc65Q8VHI7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc65Q8VHI7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.65■■□□□ 1.38
Ccdc65Q8VHI7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc65Q8VHI7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc65Q8VHI7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc65Q8VHI7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc65Q8VHI7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc65Q8VHI7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Ccdc65Q8VHI7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Ccdc65Q8VHI7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc65Q8VHI7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc65Q8VHI7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms