Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.7■■□□□ 1.22
Zcchc9Q8R1J3 Gm9812-201ENSMUST00000061934 968 ntBASIC22.7■■□□□ 1.22
Zcchc9Q8R1J3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Zcchc9Q8R1J3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Zcchc9Q8R1J3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Zcchc9Q8R1J3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Zcchc9Q8R1J3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Zcchc9Q8R1J3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Zcchc9Q8R1J3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Zcchc9Q8R1J3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.65■■□□□ 1.22
Zcchc9Q8R1J3 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.65■■□□□ 1.22
Zcchc9Q8R1J3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Zcchc9Q8R1J3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.64■■□□□ 1.21
Zcchc9Q8R1J3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.64■■□□□ 1.21
Zcchc9Q8R1J3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Zcchc9Q8R1J3 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.63■■□□□ 1.21
Zcchc9Q8R1J3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Zcchc9Q8R1J3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Zcchc9Q8R1J3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Zcchc9Q8R1J3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Zcchc9Q8R1J3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Zcchc9Q8R1J3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Zcchc9Q8R1J3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Zcchc9Q8R1J3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Zcchc9Q8R1J3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Zcchc9Q8R1J3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Zcchc9Q8R1J3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Zcchc9Q8R1J3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Zcchc9Q8R1J3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Zcchc9Q8R1J3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.57■■□□□ 1.2
Zcchc9Q8R1J3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Zcchc9Q8R1J3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Zcchc9Q8R1J3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.56■■□□□ 1.2
Zcchc9Q8R1J3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Zcchc9Q8R1J3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Zcchc9Q8R1J3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Zcchc9Q8R1J3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Zcchc9Q8R1J3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Zcchc9Q8R1J3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.55■■□□□ 1.2
Zcchc9Q8R1J3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Zcchc9Q8R1J3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Zcchc9Q8R1J3 Gm10420-201ENSMUST00000121713 882 ntBASIC22.54■■□□□ 1.2
Zcchc9Q8R1J3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.54■■□□□ 1.2
Zcchc9Q8R1J3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Zcchc9Q8R1J3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Zcchc9Q8R1J3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Zcchc9Q8R1J3 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.53■■□□□ 1.2
Zcchc9Q8R1J3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Zcchc9Q8R1J3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Zcchc9Q8R1J3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Zcchc9Q8R1J3 Terc-201ENSMUST00000082862 423 ntBASIC22.52■■□□□ 1.2
Zcchc9Q8R1J3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Zcchc9Q8R1J3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Zcchc9Q8R1J3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.51■■□□□ 1.19
Zcchc9Q8R1J3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Zcchc9Q8R1J3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Zcchc9Q8R1J3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Zcchc9Q8R1J3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Zcchc9Q8R1J3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Zcchc9Q8R1J3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zcchc9Q8R1J3 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zcchc9Q8R1J3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zcchc9Q8R1J3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Zcchc9Q8R1J3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zcchc9Q8R1J3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Zcchc9Q8R1J3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.47■■□□□ 1.19
Zcchc9Q8R1J3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.46■■□□□ 1.19
Zcchc9Q8R1J3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Zcchc9Q8R1J3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Zcchc9Q8R1J3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Zcchc9Q8R1J3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms