Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm1Q8K377 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm1Q8K377 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm1Q8K377 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrtm1Q8K377 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lrrtm1Q8K377 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Gm45855-201ENSMUST00000212546 880 ntBASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrtm1Q8K377 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.27■□□□□ 0.68
Lrrtm1Q8K377 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrtm1Q8K377 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm1Q8K377 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm1Q8K377 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms