Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrtm1Q8K377 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm1Q8K377 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrtm1Q8K377 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.37■□□□□ 0.69
Lrrtm1Q8K377 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrtm1Q8K377 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm1Q8K377 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm1Q8K377 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrtm1Q8K377 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lrrtm1Q8K377 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm1Q8K377 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm1Q8K377 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm1Q8K377 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.3■□□□□ 0.68
Lrrtm1Q8K377 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm1Q8K377 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Gm45855-201ENSMUST00000212546 880 ntBASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.28■□□□□ 0.68
Lrrtm1Q8K377 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrtm1Q8K377 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.27■□□□□ 0.68
Lrrtm1Q8K377 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrrtm1Q8K377 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm1Q8K377 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm1Q8K377 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm1Q8K377 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm1Q8K377 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm1Q8K377 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Lrrtm1Q8K377 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm1Q8K377 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm1Q8K377 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms