Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cystm1Q8K353 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cystm1Q8K353 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.18□□□□□ -0.14
Cystm1Q8K353 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Iqck-206ENSMUST00000208658 2891 ntBASIC14.18□□□□□ -0.14
Cystm1Q8K353 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC14.18□□□□□ -0.14
Cystm1Q8K353 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cystm1Q8K353 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cystm1Q8K353 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cystm1Q8K353 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cystm1Q8K353 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cystm1Q8K353 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.16□□□□□ -0.14
Cystm1Q8K353 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cystm1Q8K353 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cystm1Q8K353 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cystm1Q8K353 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cystm1Q8K353 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Cystm1Q8K353 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC14.13□□□□□ -0.15
Cystm1Q8K353 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cystm1Q8K353 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.12□□□□□ -0.15
Cystm1Q8K353 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cystm1Q8K353 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.11□□□□□ -0.15
Cystm1Q8K353 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.11□□□□□ -0.15
Cystm1Q8K353 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cystm1Q8K353 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cystm1Q8K353 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cystm1Q8K353 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.09□□□□□ -0.15
Cystm1Q8K353 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cystm1Q8K353 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cystm1Q8K353 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cystm1Q8K353 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cystm1Q8K353 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Cystm1Q8K353 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cystm1Q8K353 Gm30346-201ENSMUST00000218641 1699 ntBASIC14.08□□□□□ -0.16
Cystm1Q8K353 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cystm1Q8K353 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cystm1Q8K353 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cystm1Q8K353 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cystm1Q8K353 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms