Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sox30Q8CGW4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sox30Q8CGW4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sox30Q8CGW4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sox30Q8CGW4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sox30Q8CGW4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.16■■□□□ 1.62
Sox30Q8CGW4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Sox30Q8CGW4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sox30Q8CGW4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.14■■□□□ 1.62
Sox30Q8CGW4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sox30Q8CGW4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sox30Q8CGW4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Sox30Q8CGW4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sox30Q8CGW4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sox30Q8CGW4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sox30Q8CGW4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sox30Q8CGW4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.12■■□□□ 1.61
Sox30Q8CGW4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Sox30Q8CGW4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sox30Q8CGW4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sox30Q8CGW4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sox30Q8CGW4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.1■■□□□ 1.61
Sox30Q8CGW4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sox30Q8CGW4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sox30Q8CGW4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sox30Q8CGW4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.09■■□□□ 1.61
Sox30Q8CGW4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sox30Q8CGW4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sox30Q8CGW4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sox30Q8CGW4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sox30Q8CGW4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sox30Q8CGW4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sox30Q8CGW4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
Sox30Q8CGW4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sox30Q8CGW4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.06■■□□□ 1.6
Sox30Q8CGW4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sox30Q8CGW4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sox30Q8CGW4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Sox30Q8CGW4 Nkain2-201ENSMUST00000092602 558 ntBASIC25.05■■□□□ 1.6
Sox30Q8CGW4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sox30Q8CGW4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sox30Q8CGW4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sox30Q8CGW4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Sox30Q8CGW4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sox30Q8CGW4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
Sox30Q8CGW4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.04■■□□□ 1.6
Sox30Q8CGW4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sox30Q8CGW4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sox30Q8CGW4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Sox30Q8CGW4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sox30Q8CGW4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sox30Q8CGW4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Sox30Q8CGW4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sox30Q8CGW4 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.01■■□□□ 1.59
Sox30Q8CGW4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sox30Q8CGW4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sox30Q8CGW4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sox30Q8CGW4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sox30Q8CGW4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sox30Q8CGW4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25■■□□□ 1.59
Sox30Q8CGW4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Sox30Q8CGW4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sox30Q8CGW4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sox30Q8CGW4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Sox30Q8CGW4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sox30Q8CGW4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Sox30Q8CGW4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Sox30Q8CGW4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sox30Q8CGW4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sox30Q8CGW4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Sox30Q8CGW4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sox30Q8CGW4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Sox30Q8CGW4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sox30Q8CGW4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Sox30Q8CGW4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sox30Q8CGW4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Sox30Q8CGW4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.93■■□□□ 1.58
Sox30Q8CGW4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms