Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp28Q8CGV8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp28Q8CGV8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp28Q8CGV8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp28Q8CGV8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.14■□□□□ 0.66
Mmp28Q8CGV8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Gm9397-201ENSMUST00000200125 605 ntBASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms