Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp28Q8CGV8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp28Q8CGV8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp28Q8CGV8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp28Q8CGV8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp28Q8CGV8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp28Q8CGV8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp28Q8CGV8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Mmp28Q8CGV8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp28Q8CGV8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp28Q8CGV8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp28Q8CGV8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp28Q8CGV8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp28Q8CGV8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp28Q8CGV8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.16■□□□□ 0.66
Mmp28Q8CGV8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp28Q8CGV8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp28Q8CGV8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.14■□□□□ 0.66
Mmp28Q8CGV8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Gm9397-201ENSMUST00000200125 605 ntBASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp28Q8CGV8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp28Q8CGV8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms