Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.37■■□□□ 1.17
Rab43Q8CG50 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab43Q8CG50 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab43Q8CG50 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab43Q8CG50 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab43Q8CG50 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rab43Q8CG50 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab43Q8CG50 Amer2-203ENSMUST00000225247 2662 ntBASIC22.36■■□□□ 1.17
Rab43Q8CG50 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Rab43Q8CG50 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Gm44428-201ENSMUST00000204474 874 ntBASIC22.34■■□□□ 1.17
Rab43Q8CG50 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab43Q8CG50 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rab43Q8CG50 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rab43Q8CG50 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rab43Q8CG50 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Rab43Q8CG50 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rab43Q8CG50 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rab43Q8CG50 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.32■■□□□ 1.16
Rab43Q8CG50 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rab43Q8CG50 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.32■■□□□ 1.16
Rab43Q8CG50 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rab43Q8CG50 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rab43Q8CG50 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.31■■□□□ 1.16
Rab43Q8CG50 Gm5921-201ENSMUST00000075898 882 ntBASIC22.31■■□□□ 1.16
Rab43Q8CG50 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rab43Q8CG50 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rab43Q8CG50 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rab43Q8CG50 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.31■■□□□ 1.16
Rab43Q8CG50 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rab43Q8CG50 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.29■■□□□ 1.16
Rab43Q8CG50 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rab43Q8CG50 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rab43Q8CG50 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rab43Q8CG50 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.27■■□□□ 1.16
Rab43Q8CG50 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rab43Q8CG50 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rab43Q8CG50 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rab43Q8CG50 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rab43Q8CG50 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rab43Q8CG50 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rab43Q8CG50 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rab43Q8CG50 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rab43Q8CG50 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rab43Q8CG50 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
Rab43Q8CG50 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rab43Q8CG50 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rab43Q8CG50 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.23■■□□□ 1.15
Rab43Q8CG50 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rab43Q8CG50 Gm5812-201ENSMUST00000061073 957 ntBASIC22.22■■□□□ 1.15
Rab43Q8CG50 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.22■■□□□ 1.15
Rab43Q8CG50 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rab43Q8CG50 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.22■■□□□ 1.15
Rab43Q8CG50 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rab43Q8CG50 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rab43Q8CG50 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rab43Q8CG50 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rab43Q8CG50 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rab43Q8CG50 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Rab43Q8CG50 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rab43Q8CG50 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rab43Q8CG50 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rab43Q8CG50 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rab43Q8CG50 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rab43Q8CG50 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Rab43Q8CG50 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rab43Q8CG50 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Rab43Q8CG50 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rab43Q8CG50 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rab43Q8CG50 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rab43Q8CG50 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rab43Q8CG50 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab43Q8CG50 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rab43Q8CG50 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab43Q8CG50 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.16■■□□□ 1.14
Rab43Q8CG50 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab43Q8CG50 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.13■■□□□ 1.13
Rab43Q8CG50 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Rab43Q8CG50 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rab43Q8CG50 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.13■■□□□ 1.13
Rab43Q8CG50 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rab43Q8CG50 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rab43Q8CG50 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rab43Q8CG50 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.11■■□□□ 1.13
Rab43Q8CG50 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.11■■□□□ 1.13
Rab43Q8CG50 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.11■■□□□ 1.13
Rab43Q8CG50 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rab43Q8CG50 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rab43Q8CG50 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rab43Q8CG50 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rab43Q8CG50 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rab43Q8CG50 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rab43Q8CG50 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rab43Q8CG50 Gm15546-201ENSMUST00000122095 826 ntBASIC22.08■■□□□ 1.13
Rab43Q8CG50 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms