Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Nkain2-201ENSMUST00000092602 558 ntBASIC28.39■■■□□ 2.14
Smc5Q8CG46 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Smc5Q8CG46 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Smc5Q8CG46 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Smc5Q8CG46 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Smc5Q8CG46 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.37■■■□□ 2.13
Smc5Q8CG46 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.37■■■□□ 2.13
Smc5Q8CG46 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Smc5Q8CG46 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Smc5Q8CG46 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Smc5Q8CG46 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Smc5Q8CG46 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc5Q8CG46 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc5Q8CG46 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc5Q8CG46 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smc5Q8CG46 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC28.33■■■□□ 2.13
Smc5Q8CG46 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Smc5Q8CG46 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Smc5Q8CG46 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Smc5Q8CG46 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Smc5Q8CG46 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.32■■■□□ 2.12
Smc5Q8CG46 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Smc5Q8CG46 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Smc5Q8CG46 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Smc5Q8CG46 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Smc5Q8CG46 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Smc5Q8CG46 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Smc5Q8CG46 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Smc5Q8CG46 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Smc5Q8CG46 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Smc5Q8CG46 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Smc5Q8CG46 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC28.3■■■□□ 2.12
Smc5Q8CG46 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.29■■■□□ 2.12
Smc5Q8CG46 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC28.29■■■□□ 2.12
Smc5Q8CG46 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Smc5Q8CG46 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Smc5Q8CG46 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Smc5Q8CG46 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.27■■■□□ 2.12
Smc5Q8CG46 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Smc5Q8CG46 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Smc5Q8CG46 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.26■■■□□ 2.11
Smc5Q8CG46 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Smc5Q8CG46 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Smc5Q8CG46 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc5Q8CG46 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc5Q8CG46 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc5Q8CG46 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smc5Q8CG46 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.23■■■□□ 2.11
Smc5Q8CG46 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Smc5Q8CG46 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Smc5Q8CG46 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Smc5Q8CG46 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Smc5Q8CG46 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Smc5Q8CG46 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc5Q8CG46 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.2■■■□□ 2.1
Smc5Q8CG46 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc5Q8CG46 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.2■■■□□ 2.1
Smc5Q8CG46 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc5Q8CG46 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Smc5Q8CG46 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.19■■■□□ 2.1
Smc5Q8CG46 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Smc5Q8CG46 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smc5Q8CG46 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Smc5Q8CG46 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Smc5Q8CG46 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Smc5Q8CG46 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Smc5Q8CG46 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Smc5Q8CG46 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Smc5Q8CG46 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Smc5Q8CG46 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Smc5Q8CG46 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Smc5Q8CG46 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
Smc5Q8CG46 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc5Q8CG46 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc5Q8CG46 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc5Q8CG46 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc5Q8CG46 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Smc5Q8CG46 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Smc5Q8CG46 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
Smc5Q8CG46 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Smc5Q8CG46 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Smc5Q8CG46 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms