Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd4Q8CC84 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd4Q8CC84 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd4Q8CC84 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd4Q8CC84 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lysmd4Q8CC84 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Lysmd4Q8CC84 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lysmd4Q8CC84 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd4Q8CC84 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lysmd4Q8CC84 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd4Q8CC84 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd4Q8CC84 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd4Q8CC84 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.44■□□□□ 0.86
Lysmd4Q8CC84 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
Lysmd4Q8CC84 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.44■□□□□ 0.86
Lysmd4Q8CC84 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd4Q8CC84 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd4Q8CC84 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd4Q8CC84 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.42■□□□□ 0.86
Lysmd4Q8CC84 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd4Q8CC84 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Lysmd4Q8CC84 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd4Q8CC84 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd4Q8CC84 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd4Q8CC84 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd4Q8CC84 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd4Q8CC84 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd4Q8CC84 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lysmd4Q8CC84 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.38■□□□□ 0.85
Lysmd4Q8CC84 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lysmd4Q8CC84 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd4Q8CC84 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 Gm45855-201ENSMUST00000212546 880 ntBASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd4Q8CC84 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd4Q8CC84 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd4Q8CC84 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd4Q8CC84 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd4Q8CC84 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd4Q8CC84 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd4Q8CC84 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Lysmd4Q8CC84 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd4Q8CC84 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lysmd4Q8CC84 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Lysmd4Q8CC84 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd4Q8CC84 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lysmd4Q8CC84 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lysmd4Q8CC84 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd4Q8CC84 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd4Q8CC84 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd4Q8CC84 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd4Q8CC84 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd4Q8CC84 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lysmd4Q8CC84 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.3■□□□□ 0.84
Lysmd4Q8CC84 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd4Q8CC84 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd4Q8CC84 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd4Q8CC84 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd4Q8CC84 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd4Q8CC84 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd4Q8CC84 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd4Q8CC84 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.28■□□□□ 0.84
Lysmd4Q8CC84 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd4Q8CC84 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd4Q8CC84 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms