Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.07■■□□□ 1.44
Brat1Q8C3R1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.07■■□□□ 1.44
Brat1Q8C3R1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Brat1Q8C3R1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
Brat1Q8C3R1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Brat1Q8C3R1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Brat1Q8C3R1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.06■■□□□ 1.44
Brat1Q8C3R1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Brat1Q8C3R1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Brat1Q8C3R1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Brat1Q8C3R1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Brat1Q8C3R1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Brat1Q8C3R1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Brat1Q8C3R1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Brat1Q8C3R1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Brat1Q8C3R1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.02■■□□□ 1.44
Brat1Q8C3R1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Brat1Q8C3R1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Brat1Q8C3R1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Brat1Q8C3R1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Brat1Q8C3R1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24■■□□□ 1.43
Brat1Q8C3R1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Brat1Q8C3R1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.98■■□□□ 1.43
Brat1Q8C3R1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Brat1Q8C3R1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Brat1Q8C3R1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Brat1Q8C3R1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Brat1Q8C3R1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Brat1Q8C3R1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Brat1Q8C3R1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brat1Q8C3R1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Brat1Q8C3R1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.94■■□□□ 1.42
Brat1Q8C3R1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Brat1Q8C3R1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.94■■□□□ 1.42
Brat1Q8C3R1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Brat1Q8C3R1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brat1Q8C3R1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Brat1Q8C3R1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Brat1Q8C3R1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.92■■□□□ 1.42
Brat1Q8C3R1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.91■■□□□ 1.42
Brat1Q8C3R1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brat1Q8C3R1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.9■■□□□ 1.42
Brat1Q8C3R1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Brat1Q8C3R1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Brat1Q8C3R1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
Brat1Q8C3R1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Brat1Q8C3R1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Brat1Q8C3R1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Brat1Q8C3R1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.88■■□□□ 1.41
Brat1Q8C3R1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Brat1Q8C3R1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Brat1Q8C3R1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Brat1Q8C3R1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Brat1Q8C3R1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Brat1Q8C3R1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.86■■□□□ 1.41
Brat1Q8C3R1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Brat1Q8C3R1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Brat1Q8C3R1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.85■■□□□ 1.41
Brat1Q8C3R1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Brat1Q8C3R1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Brat1Q8C3R1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.84■■□□□ 1.41
Brat1Q8C3R1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Brat1Q8C3R1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.83■■□□□ 1.41
Brat1Q8C3R1 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.83■■□□□ 1.41
Brat1Q8C3R1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Brat1Q8C3R1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Brat1Q8C3R1 Gm27502-201ENSMUST00000183495 199 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms