Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.49■□□□□ 0.55
Chd9Q8BYH8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd9Q8BYH8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Etf1-202ENSMUST00000180351 108 ntBASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.48■□□□□ 0.55
Chd9Q8BYH8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd9Q8BYH8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd9Q8BYH8 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.47■□□□□ 0.55
Chd9Q8BYH8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.47■□□□□ 0.55
Chd9Q8BYH8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd9Q8BYH8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd9Q8BYH8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Chd9Q8BYH8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Chd9Q8BYH8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd9Q8BYH8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd9Q8BYH8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chd9Q8BYH8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd9Q8BYH8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd9Q8BYH8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd9Q8BYH8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd9Q8BYH8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chd9Q8BYH8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd9Q8BYH8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd9Q8BYH8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd9Q8BYH8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Chd9Q8BYH8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd9Q8BYH8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd9Q8BYH8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd9Q8BYH8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd9Q8BYH8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd9Q8BYH8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd9Q8BYH8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Chd9Q8BYH8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd9Q8BYH8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd9Q8BYH8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.38■□□□□ 0.53
Chd9Q8BYH8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.38■□□□□ 0.53
Chd9Q8BYH8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.38■□□□□ 0.53
Chd9Q8BYH8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd9Q8BYH8 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.37■□□□□ 0.53
Chd9Q8BYH8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd9Q8BYH8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd9Q8BYH8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.37■□□□□ 0.53
Chd9Q8BYH8 Gm37136-201ENSMUST00000194368 194 ntBASIC18.37■□□□□ 0.53
Chd9Q8BYH8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.37■□□□□ 0.53
Chd9Q8BYH8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd9Q8BYH8 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.35■□□□□ 0.53
Chd9Q8BYH8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd9Q8BYH8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.35■□□□□ 0.53
Chd9Q8BYH8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd9Q8BYH8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd9Q8BYH8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chd9Q8BYH8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd9Q8BYH8 Gm8495-201ENSMUST00000188740 694 ntBASIC18.34■□□□□ 0.53
Chd9Q8BYH8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd9Q8BYH8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd9Q8BYH8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd9Q8BYH8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.33■□□□□ 0.52
Chd9Q8BYH8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd9Q8BYH8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd9Q8BYH8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd9Q8BYH8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd9Q8BYH8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd9Q8BYH8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Chd9Q8BYH8 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.31■□□□□ 0.52
Chd9Q8BYH8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chd9Q8BYH8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd9Q8BYH8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.29■□□□□ 0.52
Chd9Q8BYH8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms