Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm11Q8BUV6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.35■□□□□ 0.69
Lsm11Q8BUV6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm11Q8BUV6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm11Q8BUV6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm11Q8BUV6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Lsm11Q8BUV6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm11Q8BUV6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.33■□□□□ 0.69
Lsm11Q8BUV6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm11Q8BUV6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm11Q8BUV6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm11Q8BUV6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm11Q8BUV6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm11Q8BUV6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm11Q8BUV6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm11Q8BUV6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm11Q8BUV6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm11Q8BUV6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm11Q8BUV6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm11Q8BUV6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm11Q8BUV6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm11Q8BUV6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm11Q8BUV6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm11Q8BUV6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lsm11Q8BUV6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.27■□□□□ 0.67
Lsm11Q8BUV6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm11Q8BUV6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm11Q8BUV6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm11Q8BUV6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm11Q8BUV6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm11Q8BUV6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm11Q8BUV6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm11Q8BUV6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm11Q8BUV6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm11Q8BUV6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm11Q8BUV6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm11Q8BUV6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm11Q8BUV6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm11Q8BUV6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm11Q8BUV6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm11Q8BUV6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.23■□□□□ 0.67
Lsm11Q8BUV6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm11Q8BUV6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm11Q8BUV6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm11Q8BUV6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm11Q8BUV6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lsm11Q8BUV6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm11Q8BUV6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm11Q8BUV6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm11Q8BUV6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 Gm45855-201ENSMUST00000212546 880 ntBASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.2■□□□□ 0.66
Lsm11Q8BUV6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm11Q8BUV6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm11Q8BUV6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm11Q8BUV6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm11Q8BUV6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm11Q8BUV6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm11Q8BUV6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Lsm11Q8BUV6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lsm11Q8BUV6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm11Q8BUV6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm11Q8BUV6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm11Q8BUV6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms