Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.48■■□□□ 1.67
Usp6nlQ80XC3 Gm44428-201ENSMUST00000204474 874 ntBASIC25.48■■□□□ 1.67
Usp6nlQ80XC3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.45■■□□□ 1.66
Usp6nlQ80XC3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Usp6nlQ80XC3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Usp6nlQ80XC3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Usp6nlQ80XC3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Usp6nlQ80XC3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Usp6nlQ80XC3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Usp6nlQ80XC3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Amer2-203ENSMUST00000225247 2662 ntBASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.35■■□□□ 1.65
Usp6nlQ80XC3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Gm15546-201ENSMUST00000122095 826 ntBASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Gm22567-201ENSMUST00000175542 342 ntBASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.28■■□□□ 1.64
Usp6nlQ80XC3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Usp6nlQ80XC3 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.27■■□□□ 1.64
Usp6nlQ80XC3 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.27■■□□□ 1.64
Usp6nlQ80XC3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Usp6nlQ80XC3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Usp6nlQ80XC3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Usp6nlQ80XC3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Usp6nlQ80XC3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Usp6nlQ80XC3 Gm13238-201ENSMUST00000117655 780 ntBASIC25.23■■□□□ 1.63
Usp6nlQ80XC3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gm43566-201ENSMUST00000196851 808 ntBASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Usp6nlQ80XC3 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.17■■□□□ 1.62
Usp6nlQ80XC3 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.16■■□□□ 1.62
Usp6nlQ80XC3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms