Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.72■■□□□ 1.23
Trappc6aQ78XR0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trappc6aQ78XR0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Trappc6aQ78XR0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.7■■□□□ 1.22
Trappc6aQ78XR0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Trappc6aQ78XR0 Amer2-203ENSMUST00000225247 2662 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm15546-201ENSMUST00000122095 826 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trappc6aQ78XR0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trappc6aQ78XR0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.66■■□□□ 1.22
Trappc6aQ78XR0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trappc6aQ78XR0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trappc6aQ78XR0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trappc6aQ78XR0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trappc6aQ78XR0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trappc6aQ78XR0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trappc6aQ78XR0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Gm15820-201ENSMUST00000201566 728 ntBASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 185.9 ms