Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.75■■□□□ 1.23
Trappc6aQ78XR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.74■■□□□ 1.23
Trappc6aQ78XR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.73■■□□□ 1.23
Trappc6aQ78XR0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.72■■□□□ 1.23
Trappc6aQ78XR0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trappc6aQ78XR0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trappc6aQ78XR0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Trappc6aQ78XR0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.7■■□□□ 1.22
Trappc6aQ78XR0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Trappc6aQ78XR0 Amer2-203ENSMUST00000225247 2662 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm15546-201ENSMUST00000122095 826 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trappc6aQ78XR0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trappc6aQ78XR0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trappc6aQ78XR0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Trappc6aQ78XR0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.66■■□□□ 1.22
Trappc6aQ78XR0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trappc6aQ78XR0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trappc6aQ78XR0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trappc6aQ78XR0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trappc6aQ78XR0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trappc6aQ78XR0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trappc6aQ78XR0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trappc6aQ78XR0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Trappc6aQ78XR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trappc6aQ78XR0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trappc6aQ78XR0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trappc6aQ78XR0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trappc6aQ78XR0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trappc6aQ78XR0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trappc6aQ78XR0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trappc6aQ78XR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Gm15820-201ENSMUST00000201566 728 ntBASIC22.52■■□□□ 1.2
Trappc6aQ78XR0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trappc6aQ78XR0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trappc6aQ78XR0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms