Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clns1aQ61189 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clns1aQ61189 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clns1aQ61189 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clns1aQ61189 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clns1aQ61189 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.38■□□□□ 0.69
Clns1aQ61189 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.38■□□□□ 0.69
Clns1aQ61189 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Clns1aQ61189 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clns1aQ61189 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clns1aQ61189 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clns1aQ61189 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clns1aQ61189 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.37■□□□□ 0.69
Clns1aQ61189 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clns1aQ61189 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clns1aQ61189 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clns1aQ61189 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clns1aQ61189 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clns1aQ61189 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clns1aQ61189 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clns1aQ61189 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clns1aQ61189 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clns1aQ61189 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clns1aQ61189 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clns1aQ61189 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Clns1aQ61189 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clns1aQ61189 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clns1aQ61189 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clns1aQ61189 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clns1aQ61189 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clns1aQ61189 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clns1aQ61189 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clns1aQ61189 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clns1aQ61189 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clns1aQ61189 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Clns1aQ61189 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Clns1aQ61189 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clns1aQ61189 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clns1aQ61189 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.32■□□□□ 0.68
Clns1aQ61189 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clns1aQ61189 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clns1aQ61189 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clns1aQ61189 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clns1aQ61189 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clns1aQ61189 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Clns1aQ61189 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.31■□□□□ 0.68
Clns1aQ61189 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.31■□□□□ 0.68
Clns1aQ61189 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clns1aQ61189 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clns1aQ61189 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clns1aQ61189 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.3■□□□□ 0.68
Clns1aQ61189 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clns1aQ61189 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clns1aQ61189 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clns1aQ61189 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.29■□□□□ 0.68
Clns1aQ61189 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Clns1aQ61189 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clns1aQ61189 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clns1aQ61189 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.28■□□□□ 0.68
Clns1aQ61189 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clns1aQ61189 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clns1aQ61189 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clns1aQ61189 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clns1aQ61189 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clns1aQ61189 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Clns1aQ61189 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clns1aQ61189 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clns1aQ61189 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clns1aQ61189 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clns1aQ61189 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Clns1aQ61189 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clns1aQ61189 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.26■□□□□ 0.67
Clns1aQ61189 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clns1aQ61189 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Clns1aQ61189 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clns1aQ61189 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Clns1aQ61189 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clns1aQ61189 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clns1aQ61189 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clns1aQ61189 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clns1aQ61189 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clns1aQ61189 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clns1aQ61189 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clns1aQ61189 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clns1aQ61189 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.24■□□□□ 0.67
Clns1aQ61189 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clns1aQ61189 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clns1aQ61189 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clns1aQ61189 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms