Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15-1-dv6-1Q5R1D2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.55■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Zfp131-205ENSMUST00000223812 663 ntBASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Gm24970-201ENSMUST00000175582 82 ntBASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav15-1-dv6-1Q5R1D2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms