Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.71■■■□□ 2.51
Mdc1Q5PSV9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Mdc1Q5PSV9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Mdc1Q5PSV9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.71■■■□□ 2.51
Mdc1Q5PSV9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30.7■■■□□ 2.51
Mdc1Q5PSV9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.7■■■□□ 2.51
Mdc1Q5PSV9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.7■■■□□ 2.51
Mdc1Q5PSV9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Mdc1Q5PSV9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.7■■■□□ 2.5
Mdc1Q5PSV9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Mdc1Q5PSV9 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.69■■■□□ 2.5
Mdc1Q5PSV9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Mdc1Q5PSV9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Mdc1Q5PSV9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Mdc1Q5PSV9 Gm5921-201ENSMUST00000075898 882 ntBASIC30.66■■■□□ 2.5
Mdc1Q5PSV9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Mdc1Q5PSV9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Mdc1Q5PSV9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Mdc1Q5PSV9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Mdc1Q5PSV9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.61■■■□□ 2.49
Mdc1Q5PSV9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Mdc1Q5PSV9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.6■■■□□ 2.49
Mdc1Q5PSV9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Mdc1Q5PSV9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Mdc1Q5PSV9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Mdc1Q5PSV9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Mdc1Q5PSV9 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.59■■■□□ 2.49
Mdc1Q5PSV9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Mdc1Q5PSV9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Mdc1Q5PSV9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.58■■■□□ 2.49
Mdc1Q5PSV9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.57■■■□□ 2.48
Mdc1Q5PSV9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Mdc1Q5PSV9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Mdc1Q5PSV9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Mdc1Q5PSV9 Gm44428-201ENSMUST00000204474 874 ntBASIC30.55■■■□□ 2.48
Mdc1Q5PSV9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Mdc1Q5PSV9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Mdc1Q5PSV9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Mdc1Q5PSV9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Mdc1Q5PSV9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Mdc1Q5PSV9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Mdc1Q5PSV9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Mdc1Q5PSV9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Mdc1Q5PSV9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
Mdc1Q5PSV9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.51■■■□□ 2.47
Mdc1Q5PSV9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Mdc1Q5PSV9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Mdc1Q5PSV9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Mdc1Q5PSV9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Mdc1Q5PSV9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.48■■■□□ 2.47
Mdc1Q5PSV9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
Mdc1Q5PSV9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30.47■■■□□ 2.47
Mdc1Q5PSV9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Mdc1Q5PSV9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Mdc1Q5PSV9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Mdc1Q5PSV9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Mdc1Q5PSV9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Mdc1Q5PSV9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC30.44■■■□□ 2.46
Mdc1Q5PSV9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.44■■■□□ 2.46
Mdc1Q5PSV9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Mdc1Q5PSV9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Mdc1Q5PSV9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
Mdc1Q5PSV9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Mdc1Q5PSV9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Mdc1Q5PSV9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Mdc1Q5PSV9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.42■■■□□ 2.46
Mdc1Q5PSV9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Mdc1Q5PSV9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Mdc1Q5PSV9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Mdc1Q5PSV9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Mdc1Q5PSV9 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.41■■■□□ 2.46
Mdc1Q5PSV9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Mdc1Q5PSV9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Mdc1Q5PSV9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Mdc1Q5PSV9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Mdc1Q5PSV9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Mdc1Q5PSV9 Gm15546-201ENSMUST00000122095 826 ntBASIC30.38■■■□□ 2.45
Mdc1Q5PSV9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Mdc1Q5PSV9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Mdc1Q5PSV9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Mdc1Q5PSV9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Mdc1Q5PSV9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Mdc1Q5PSV9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Mdc1Q5PSV9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Mdc1Q5PSV9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Mdc1Q5PSV9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Mdc1Q5PSV9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Mdc1Q5PSV9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.35■■■□□ 2.45
Mdc1Q5PSV9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Mdc1Q5PSV9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Mdc1Q5PSV9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.33■■■□□ 2.45
Mdc1Q5PSV9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Mdc1Q5PSV9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Mdc1Q5PSV9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Mdc1Q5PSV9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms