Protein–RNA interactions for Protein: Q3U1N2

Srebf2, Sterol regulatory element-binding protein 2, mousemouse

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf2Q3U1N2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Srebf2Q3U1N2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Srebf2Q3U1N2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Srebf2Q3U1N2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Srebf2Q3U1N2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Srebf2Q3U1N2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Srebf2Q3U1N2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Srebf2Q3U1N2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Srebf2Q3U1N2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Srebf2Q3U1N2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.28■■□□□ 1.64
Srebf2Q3U1N2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Srebf2Q3U1N2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Srebf2Q3U1N2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.27■■□□□ 1.64
Srebf2Q3U1N2 Terc-201ENSMUST00000082862 423 ntBASIC25.26■■□□□ 1.63
Srebf2Q3U1N2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Srebf2Q3U1N2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Srebf2Q3U1N2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Srebf2Q3U1N2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Srebf2Q3U1N2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.24■■□□□ 1.63
Srebf2Q3U1N2 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.23■■□□□ 1.63
Srebf2Q3U1N2 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.23■■□□□ 1.63
Srebf2Q3U1N2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Srebf2Q3U1N2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.23■■□□□ 1.63
Srebf2Q3U1N2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.23■■□□□ 1.63
Srebf2Q3U1N2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Srebf2Q3U1N2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Srebf2Q3U1N2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Srebf2Q3U1N2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.22■■□□□ 1.63
Srebf2Q3U1N2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Srebf2Q3U1N2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Srebf2Q3U1N2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Srebf2Q3U1N2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Srebf2Q3U1N2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Srebf2Q3U1N2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Srebf2Q3U1N2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Srebf2Q3U1N2 Gm15546-201ENSMUST00000122095 826 ntBASIC25.17■■□□□ 1.62
Srebf2Q3U1N2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Srebf2Q3U1N2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Srebf2Q3U1N2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Srebf2Q3U1N2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Srebf2Q3U1N2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Srebf2Q3U1N2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Srebf2Q3U1N2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Srebf2Q3U1N2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Srebf2Q3U1N2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Srebf2Q3U1N2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Srebf2Q3U1N2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Srebf2Q3U1N2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Srebf2Q3U1N2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Srebf2Q3U1N2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Srebf2Q3U1N2 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.11■■□□□ 1.61
Srebf2Q3U1N2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Srebf2Q3U1N2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Srebf2Q3U1N2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Srebf2Q3U1N2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.1■■□□□ 1.61
Srebf2Q3U1N2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Srebf2Q3U1N2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Srebf2Q3U1N2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Srebf2Q3U1N2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Srebf2Q3U1N2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Srebf2Q3U1N2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Srebf2Q3U1N2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Srebf2Q3U1N2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Srebf2Q3U1N2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Srebf2Q3U1N2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.08■■□□□ 1.61
Srebf2Q3U1N2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.08■■□□□ 1.6
Srebf2Q3U1N2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Srebf2Q3U1N2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Srebf2Q3U1N2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Srebf2Q3U1N2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Srebf2Q3U1N2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 Gm44428-201ENSMUST00000204474 874 ntBASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.06■■□□□ 1.6
Srebf2Q3U1N2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Srebf2Q3U1N2 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.05■■□□□ 1.6
Srebf2Q3U1N2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Srebf2Q3U1N2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Srebf2Q3U1N2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Srebf2Q3U1N2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.04■■□□□ 1.6
Srebf2Q3U1N2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Srebf2Q3U1N2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Srebf2Q3U1N2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Srebf2Q3U1N2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.03■■□□□ 1.6
Srebf2Q3U1N2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Srebf2Q3U1N2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.03■■□□□ 1.6
Srebf2Q3U1N2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Srebf2Q3U1N2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Srebf2Q3U1N2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Srebf2Q3U1N2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Srebf2Q3U1N2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Srebf2Q3U1N2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Srebf2Q3U1N2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Srebf2Q3U1N2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25■■□□□ 1.59
Srebf2Q3U1N2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25■■□□□ 1.59
Srebf2Q3U1N2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Srebf2Q3U1N2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Srebf2Q3U1N2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms