Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.49■■□□□ 1.03
Khdc4Q3TCX3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Khdc4Q3TCX3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc4Q3TCX3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Khdc4Q3TCX3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Khdc4Q3TCX3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.45■■□□□ 1.02
Khdc4Q3TCX3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Khdc4Q3TCX3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.45■■□□□ 1.02
Khdc4Q3TCX3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc4Q3TCX3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Khdc4Q3TCX3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.43■■□□□ 1.02
Khdc4Q3TCX3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Khdc4Q3TCX3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.42■■□□□ 1.02
Khdc4Q3TCX3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Khdc4Q3TCX3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Khdc4Q3TCX3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc4Q3TCX3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Khdc4Q3TCX3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Khdc4Q3TCX3 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.39■■□□□ 1.01
Khdc4Q3TCX3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Khdc4Q3TCX3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Khdc4Q3TCX3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Khdc4Q3TCX3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.37■■□□□ 1.01
Khdc4Q3TCX3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Khdc4Q3TCX3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Khdc4Q3TCX3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.36■■□□□ 1.01
Khdc4Q3TCX3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Gm9812-201ENSMUST00000061934 968 ntBASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Khdc4Q3TCX3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc4Q3TCX3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Khdc4Q3TCX3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Khdc4Q3TCX3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms