Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upk2P38575 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk2P38575 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk2P38575 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk2P38575 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upk2P38575 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk2P38575 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk2P38575 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.98■□□□□ 0.79
Upk2P38575 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Upk2P38575 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.98■□□□□ 0.79
Upk2P38575 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upk2P38575 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk2P38575 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk2P38575 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upk2P38575 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upk2P38575 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.95■□□□□ 0.78
Upk2P38575 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Upk2P38575 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Upk2P38575 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upk2P38575 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Upk2P38575 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upk2P38575 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upk2P38575 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Upk2P38575 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Upk2P38575 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Upk2P38575 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Upk2P38575 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk2P38575 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Upk2P38575 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk2P38575 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk2P38575 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk2P38575 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Upk2P38575 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Upk2P38575 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Upk2P38575 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Upk2P38575 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Upk2P38575 Mir3960-201ENSMUST00000198213 73 ntBASIC19.91■□□□□ 0.78
Upk2P38575 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Upk2P38575 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Upk2P38575 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
Upk2P38575 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upk2P38575 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Upk2P38575 Gm9812-201ENSMUST00000061934 968 ntBASIC19.9■□□□□ 0.78
Upk2P38575 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.9■□□□□ 0.78
Upk2P38575 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upk2P38575 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Upk2P38575 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.89■□□□□ 0.77
Upk2P38575 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk2P38575 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk2P38575 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk2P38575 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Upk2P38575 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Upk2P38575 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Upk2P38575 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk2P38575 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk2P38575 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.87■□□□□ 0.77
Upk2P38575 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk2P38575 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk2P38575 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.87■□□□□ 0.77
Upk2P38575 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk2P38575 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk2P38575 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk2P38575 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk2P38575 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Upk2P38575 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Upk2P38575 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Upk2P38575 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk2P38575 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Upk2P38575 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk2P38575 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk2P38575 Gm45364-201ENSMUST00000210883 159 ntBASIC19.84■□□□□ 0.77
Upk2P38575 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.84■□□□□ 0.77
Upk2P38575 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk2P38575 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.83■□□□□ 0.77
Upk2P38575 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.83■□□□□ 0.77
Upk2P38575 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Upk2P38575 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk2P38575 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.83■□□□□ 0.76
Upk2P38575 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk2P38575 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk2P38575 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.82■□□□□ 0.76
Upk2P38575 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.82■□□□□ 0.76
Upk2P38575 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.82■□□□□ 0.76
Upk2P38575 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk2P38575 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk2P38575 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk2P38575 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk2P38575 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk2P38575 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.8■□□□□ 0.76
Upk2P38575 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Upk2P38575 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upk2P38575 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.78■□□□□ 0.76
Upk2P38575 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk2P38575 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms