Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.7■□□□□ 0.9
Cd40lgP27548 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd40lgP27548 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40lgP27548 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Cd40lgP27548 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
Cd40lgP27548 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40lgP27548 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40lgP27548 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cd40lgP27548 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd40lgP27548 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd40lgP27548 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40lgP27548 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40lgP27548 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40lgP27548 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40lgP27548 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd40lgP27548 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd40lgP27548 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd40lgP27548 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cd40lgP27548 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cd40lgP27548 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cd40lgP27548 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.65■□□□□ 0.9
Cd40lgP27548 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40lgP27548 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cd40lgP27548 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40lgP27548 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40lgP27548 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.62■□□□□ 0.89
Cd40lgP27548 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
Cd40lgP27548 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.62■□□□□ 0.89
Cd40lgP27548 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40lgP27548 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cd40lgP27548 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cd40lgP27548 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40lgP27548 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cd40lgP27548 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.6■□□□□ 0.89
Cd40lgP27548 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.6■□□□□ 0.89
Cd40lgP27548 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cd40lgP27548 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd40lgP27548 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 Gm11687-201ENSMUST00000118911 886 ntBASIC20.59■□□□□ 0.89
Cd40lgP27548 Gm45364-201ENSMUST00000210883 159 ntBASIC20.59■□□□□ 0.89
Cd40lgP27548 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40lgP27548 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd40lgP27548 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.58■□□□□ 0.89
Cd40lgP27548 Scarna2-201ENSMUST00000157560 414 ntBASIC20.58■□□□□ 0.89
Cd40lgP27548 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cd40lgP27548 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd40lgP27548 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd40lgP27548 Gm9806-201ENSMUST00000051080 552 ntBASIC20.57■□□□□ 0.88
Cd40lgP27548 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Cd40lgP27548 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd40lgP27548 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd40lgP27548 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd40lgP27548 Mir6538-201ENSMUST00000183713 110 ntBASIC20.56■□□□□ 0.88
Cd40lgP27548 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Cd40lgP27548 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40lgP27548 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40lgP27548 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40lgP27548 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.54■□□□□ 0.88
Cd40lgP27548 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd40lgP27548 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd40lgP27548 Gm9812-201ENSMUST00000061934 968 ntBASIC20.54■□□□□ 0.88
Cd40lgP27548 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd40lgP27548 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd40lgP27548 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40lgP27548 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40lgP27548 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40lgP27548 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40lgP27548 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.53■□□□□ 0.88
Cd40lgP27548 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40lgP27548 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cd40lgP27548 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Cd40lgP27548 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd40lgP27548 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.52■□□□□ 0.88
Cd40lgP27548 Gm16437-201ENSMUST00000025669 507 ntBASIC20.52■□□□□ 0.88
Cd40lgP27548 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cd40lgP27548 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.52■□□□□ 0.87
Cd40lgP27548 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd40lgP27548 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms